Click here to switch to the map view.

The map label for this gene is yneE [H]

Identifier: 29141899

GI number: 29141899

Start: 1492409

End: 1493356

Strand: Direct

Name: yneE [H]

Synonym: t1448

Alternate gene names: 29141899

Gene position: 1492409-1493356 (Clockwise)

Preceding gene: 29141898

Following gene: 29141908

Centisome position: 31.14

GC content: 46.41

Gene sequence:

>948_bases
ATGACAGTGCTTTTTCACCTGCTGAAGATAATCATGATCGTTAGACCACAACAGCACTGGATTCGCCTGATATTTGTCTG
GCATGGTTCCGTGTTATCTAAAATCTTTTCACGACTGCTCCTTAACTTTCTTCTTTCTATCGCCGTTATTATCATGCTGC
CCTGGTACACAATGCTGGGTATTAAGTTTACCCTTGCGCCGTTTAGCATACTGGGCGTCGCTATCGCCATTTTTCTTGGG
TTTCGCAATAATGCCTGTTATGCGCGTTACGTCGAAGCCCGACATTTGTGGGGGCAGTTGATGATCGCTTCACGCTCAAT
ACTGCGAGAGGTGAAAACAACCTTGCCTGATGAACGCGGTATCGAGGATTTTGTTCGGTTACAAATCGCTTTTGCCCACT
GTTTGCGTATGACATTGCGTCGACAGCCTCAAACGCAAGTTCTGGGAAACTATCTTGACCAGGAGGCGTTACAGAAAGTT
GTCGCTTCCCATTCCCCCGCTAACCGTATCTTATTGCTGATGGGAGAGTGGCTGGCGATTCGCCGCCGCAGCGGAAAGCT
TTCCGATATTTTATTTCATAGCCTCAACAACCGCTTAAATGATATGTCGTCAGTGTTGGCCGGCTGTGAGCGCATCGCCA
ACACGCCGGTGCCTTTTGCCTATACGTTAATTTTGCATCGTACGGTTTATCTTTTCTGCATTATGTTGCCATTTGCACTG
GTGGTTGATCTGCACTATATGACGCCGTTTATTTCGGTGCTGATTTCTTATACGTTTATCGCGCTGGATGCGTTAGCGGA
AGAGTTGGAAGATCCGTTCGGTACTGAAAATAATGATTTACCGCTGGATGCGATATGCAATGCGATAGAAATCGATTTAC
TGCAAATGAATGATGAAAGGGATATTCCGGCAAAACGGATACCGGATAAGCGCTATCAACTGACCTGA

Upstream 100 bases:

>100_bases
TTTTTTCCAACGCCTGTCAGCACCATGCAAAAAAATGTTCTACAGAGCAGGGAATCCGTGTATCACCAGAAGCTTGCAAC
CTTGATCTGGATCACGTTTA

Downstream 100 bases:

>100_bases
GTTCGTCTTAACTGGCGCAGAATGTTCATCTGCGCCATAACCTGAAAAGCAAAGCTTAATAGCCTTCTCCAACGCCGGTT
TTGGCTGGACCGGAGTAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTVLFHLLKIIMIVRPQQHWIRLIFVWHGSVLSKIFSRLLLNFLLSIAVIIMLPWYTMLGIKFTLAPFSILGVAIAIFLG
FRNNACYARYVEARHLWGQLMIASRSILREVKTTLPDERGIEDFVRLQIAFAHCLRMTLRRQPQTQVLGNYLDQEALQKV
VASHSPANRILLLMGEWLAIRRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFAL
VVDLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDERDIPAKRIPDKRYQLT

Sequences:

>Translated_315_residues
MTVLFHLLKIIMIVRPQQHWIRLIFVWHGSVLSKIFSRLLLNFLLSIAVIIMLPWYTMLGIKFTLAPFSILGVAIAIFLG
FRNNACYARYVEARHLWGQLMIASRSILREVKTTLPDERGIEDFVRLQIAFAHCLRMTLRRQPQTQVLGNYLDQEALQKV
VASHSPANRILLLMGEWLAIRRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFAL
VVDLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDERDIPAKRIPDKRYQLT
>Mature_314_residues
TVLFHLLKIIMIVRPQQHWIRLIFVWHGSVLSKIFSRLLLNFLLSIAVIIMLPWYTMLGIKFTLAPFSILGVAIAIFLGF
RNNACYARYVEARHLWGQLMIASRSILREVKTTLPDERGIEDFVRLQIAFAHCLRMTLRRQPQTQVLGNYLDQEALQKVV
ASHSPANRILLLMGEWLAIRRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFALV
VDLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDERDIPAKRIPDKRYQLT

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=304, Percent_Identity=84.8684210526316, Blast_Score=536, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 36253; Mature: 36121

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHCCCCCCCCC
>Mature Secondary Structure 
TVLFHLLKIIMIVRPQQHWIRLIFVWHGSVLSKIFSRLLLNFLLSIAVIIMLPWYTMLG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKFTLAPFSILGVAIAIFLGFRNNACYARYVEARHLWGQLMIASRSILREVKTTLPDERG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IEDFVRLQIAFAHCLRMTLRRQPQTQVLGNYLDQEALQKVVASHSPANRILLLMGEWLAI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFAL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VVDLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCCC
DIPAKRIPDKRYQLT
CCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]