Click here to switch to the map view.

The map label for this gene is 29141810

Identifier: 29141810

GI number: 29141810

Start: 1414581

End: 1415735

Strand: Reverse

Name: 29141810

Synonym: t1356

Alternate gene names: NA

Gene position: 1415735-1414581 (Counterclockwise)

Preceding gene: 29141811

Following gene: 29141809

Centisome position: 29.54

GC content: 52.99

Gene sequence:

>1155_bases
ATGGCTGAGATAAACAGTACTGCGCAAGCCACATCAGCGTTAACCAGCGTCAGCGATGTGCTGACGCCGGTATTCACTCT
GTGGTATCTGCAGAAAAACATCACCTCTGATATCGCGCCTTATGTCACCCGTGTGGTCTGGAGCGATAACATCAAAAATG
AGTCCGATACCATTGAGGTGGAGCTGGATGACACCGATGGTCGCTGGCTGGATAAGTGGTATCCGGGCAAGGGTGACACG
CTGACGCTGAAAATGGGTTATCAGGGCGAGAAACTGCTGTCCTGCGGTACATTCTCAATAGACGAGATCGAAGTGAGTTC
GCCCGCGTCCGTTGTCGCTATCCGTGGGGTGGCCACCTCGGTTAACAGTGCTCTGCGGACTAAATCCAGCCGTGGTTTTG
AGAACACCACGCTGGCAGCTGTTGCGGGGCGGATTGCCAGAAAGCACCGACTGAAACTGGTGGGCAGCATTGAGTCCATC
AAAATCGACCGGGTGACCCAGTATGCTGAAACCGACGTGGGTTTTCTGCGCCGGCTGGCCAGCGAGTATGGTTATGCAGT
GAAAGTGGTCAGTGACCAGTTGATTTTTTCTCATCTGGCCACACTGCGCAGTCAGGAGCCGGTCAGGCAGTTAAAACCGC
AGGGTGTGGCCCGCTTTTCCCTGCGTGACACCATCAACCGGGTCTATAAATCTGCAAAGGTAAAACACCAGAAAAGCAGC
AGTAAAAAACTGATCGTCTACGAAGCTGATGGTGGTACCCGTGAAAGCGACAAAAAGCTCAAAGGCGGTAAGGTTACCAG
CGCTGACTCACTTAAAGTTAACAGCCGCGTCAGCGACCCGGACAGCGCCCGGATTAAAGCGGATTCAGCACTGGCCAGAC
ATAACGAATACCAGCAGAACGGCTCCCTGACGCTGACGGGAACGCCTCAACTGACAGCAGGCAACAAAATTGAACTGGTG
GGCTTTGGACAGTTATCCGGTCCATGGCTGATAATCACTGCCCGCCATGCGTTTGAGCGTAACAGCGGCTACACCACAGA
GCTGGAAGTGGCACGGGGGCCAGTCACAAGAGGGAAAAAACAAAAAACTCAGAAACTCACGGTTTATCACCCGGATGGCA
GTACATCGACGGTGATTAAGGAGAAGAAAAAATGA

Upstream 100 bases:

>100_bases
ATCCGCACGTGGCCATTACGCCGGTGCTGCCCTCCGGGTTGTTGTTACTGATCCCGGTTATTGAGGCTGAAGATGCCCGT
ACAGAAGAGGATATTGCCCC

Downstream 100 bases:

>100_bases
CTGGTGTCACCCGTCAGATCGGTACGGTCAGTGCCGTTGATGCCGACAGGGTTCAGGCCCGCGTTCGTCTGCCTGAATGC
GATAATCTGCGCACAAACTG

Product: bacteriophage regulatory protein

Products: NA

Alternate protein names: Phage Late Control D Family Protein; Bacteriophage Regulatory Protein; Tail Protein D; Phage Late Control Gene D Protein; Late Control Gene D Protein; Phage-Related Tail Protein; Phage Late Control D; Bacteriophage Protein; Fels-2 Prophage Protein; Regulator Of Late Gene Expression; Phage Protein D; Pyocin R2_PP Tail Formation; Prophage; Prophage Tail Protein; Phage Late Control D Protein; Phage Protein; Pyocin R2_PP Tail Formation GPD; Phage Protein D-Like; Bacteriophage-Related Tail D Protein; Cytoplasmic Protein; Gene D Protein; Phage Late Control Gene D Protein GpD; Phage Protein D-Like Protein; Late Gene Regulator; Phage Late Control; Phage Tail Protein; Regulator Of Late Phage Gene Expression; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage P2 Tail Protein GPD; Bacteriophage Late Gene Regulator; Phage-Like Protein; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Control Protein For Phage Late Genes Expression; Phage Regulatory Protein; Bacteriophage Late Control D Protein; Bacteriophage Tail Protein D; Phage Regulator; Phage Tail Protein D

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MAEINSTAQATSALTSVSDVLTPVFTLWYLQKNITSDIAPYVTRVVWSDNIKNESDTIEVELDDTDGRWLDKWYPGKGDT
LTLKMGYQGEKLLSCGTFSIDEIEVSSPASVVAIRGVATSVNSALRTKSSRGFENTTLAAVAGRIARKHRLKLVGSIESI
KIDRVTQYAETDVGFLRRLASEYGYAVKVVSDQLIFSHLATLRSQEPVRQLKPQGVARFSLRDTINRVYKSAKVKHQKSS
SKKLIVYEADGGTRESDKKLKGGKVTSADSLKVNSRVSDPDSARIKADSALARHNEYQQNGSLTLTGTPQLTAGNKIELV
GFGQLSGPWLIITARHAFERNSGYTTELEVARGPVTRGKKQKTQKLTVYHPDGSTSTVIKEKKK

Sequences:

>Translated_384_residues
MAEINSTAQATSALTSVSDVLTPVFTLWYLQKNITSDIAPYVTRVVWSDNIKNESDTIEVELDDTDGRWLDKWYPGKGDT
LTLKMGYQGEKLLSCGTFSIDEIEVSSPASVVAIRGVATSVNSALRTKSSRGFENTTLAAVAGRIARKHRLKLVGSIESI
KIDRVTQYAETDVGFLRRLASEYGYAVKVVSDQLIFSHLATLRSQEPVRQLKPQGVARFSLRDTINRVYKSAKVKHQKSS
SKKLIVYEADGGTRESDKKLKGGKVTSADSLKVNSRVSDPDSARIKADSALARHNEYQQNGSLTLTGTPQLTAGNKIELV
GFGQLSGPWLIITARHAFERNSGYTTELEVARGPVTRGKKQKTQKLTVYHPDGSTSTVIKEKKK
>Mature_383_residues
AEINSTAQATSALTSVSDVLTPVFTLWYLQKNITSDIAPYVTRVVWSDNIKNESDTIEVELDDTDGRWLDKWYPGKGDTL
TLKMGYQGEKLLSCGTFSIDEIEVSSPASVVAIRGVATSVNSALRTKSSRGFENTTLAAVAGRIARKHRLKLVGSIESIK
IDRVTQYAETDVGFLRRLASEYGYAVKVVSDQLIFSHLATLRSQEPVRQLKPQGVARFSLRDTINRVYKSAKVKHQKSSS
KKLIVYEADGGTRESDKKLKGGKVTSADSLKVNSRVSDPDSARIKADSALARHNEYQQNGSLTLTGTPQLTAGNKIELVG
FGQLSGPWLIITARHAFERNSGYTTELEVARGPVTRGKKQKTQKLTVYHPDGSTSTVIKEKKK

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42215; Mature: 42084

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEINSTAQATSALTSVSDVLTPVFTLWYLQKNITSDIAPYVTRVVWSDNIKNESDTIEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
ELDDTDGRWLDKWYPGKGDTLTLKMGYQGEKLLSCGTFSIDEIEVSSPASVVAIRGVATS
EEECCCCCEECCCCCCCCCEEEEEECCCCCEEEECCCCCCCEEECCCCCEEEEEEHHHHH
VNSALRTKSSRGFENTTLAAVAGRIARKHRLKLVGSIESIKIDRVTQYAETDVGFLRRLA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHHHH
SEYGYAVKVVSDQLIFSHLATLRSQEPVRQLKPQGVARFSLRDTINRVYKSAKVKHQKSS
HHCCEEEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCC
SKKLIVYEADGGTRESDKKLKGGKVTSADSLKVNSRVSDPDSARIKADSALARHNEYQQN
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHCC
GSLTLTGTPQLTAGNKIELVGFGQLSGPWLIITARHAFERNSGYTTELEVARGPVTRGKK
CCEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHCCCCCEEEEEECCCCCCCCCC
QKTQKLTVYHPDGSTSTVIKEKKK
CCCCEEEEECCCCCCCHHHCCCCC
>Mature Secondary Structure 
AEINSTAQATSALTSVSDVLTPVFTLWYLQKNITSDIAPYVTRVVWSDNIKNESDTIEV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
ELDDTDGRWLDKWYPGKGDTLTLKMGYQGEKLLSCGTFSIDEIEVSSPASVVAIRGVATS
EEECCCCCEECCCCCCCCCEEEEEECCCCCEEEECCCCCCCEEECCCCCEEEEEEHHHHH
VNSALRTKSSRGFENTTLAAVAGRIARKHRLKLVGSIESIKIDRVTQYAETDVGFLRRLA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHHHH
SEYGYAVKVVSDQLIFSHLATLRSQEPVRQLKPQGVARFSLRDTINRVYKSAKVKHQKSS
HHCCEEEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCC
SKKLIVYEADGGTRESDKKLKGGKVTSADSLKVNSRVSDPDSARIKADSALARHNEYQQN
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHCC
GSLTLTGTPQLTAGNKIELVGFGQLSGPWLIITARHAFERNSGYTTELEVARGPVTRGKK
CCEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHCCCCCEEEEEECCCCCCCCCC
QKTQKLTVYHPDGSTSTVIKEKKK
CCCCEEEEECCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA