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The map label for this gene is rnfG

Identifier: 29141782

GI number: 29141782

Start: 1384062

End: 1384682

Strand: Reverse

Name: rnfG

Synonym: t1323

Alternate gene names: 29141782

Gene position: 1384682-1384062 (Counterclockwise)

Preceding gene: 29141783

Following gene: 29141781

Centisome position: 28.9

GC content: 52.33

Gene sequence:

>621_bases
ATGCTGAAAACGATTCGTAAACACGGTATTACGCTGGCGCTTTTTGCCGCAGGCTCTACGGGATTGACCGCGGTGATTAA
TCAGATGACAAAATCAACCATCCACGAACAAGCGCTGCAACAACAACATGCCCTGTTCGATCAGGTATTGCCGCCAGATC
GTTACAATAATAATCTGCAAGAGAGCTGTTATCTGGTCGATGCGCCCGCCCTCGGCAAAGGCACACACCGTGTTTTTATC
GCTCGCAAGGATGATAAACCCGTAGCGGCCATCATTGAGGCCACCGCGCCAGATGGCTATTCCGGCGCTATCCAGCTTAT
TGTTGGCGCAGATTTCAACGGTACTATCCTGGGGACGCGCGTGACGGAACATCATGAGACGCCAGGGTTAGGTGATAAAA
TTGAGCGCCGTTTGTCTGACTGGATTACCCACTTTAGCGGTAAAACCATCAGCGGTGAAAATGATACGCACTGGGCGGTG
AAAAAAGATGGCGGTGATTTTGATCAATTTACCGGGGCGACAATAACGCCGCGCGCCGTAGTGAATGCGGTTAAACGCGC
CGGGCTGTACGCCGAATCACTGCCCGCTCAGCTCCCCCATTTAACCGCCTGTGGAGAATAG

Upstream 100 bases:

>100_bases
GGACGGCGTTGCTTTTGCTGTCCTGTTGGCGAATATCACGGTTCCTCTGATCGACTACTACACGCGCCCCCGCGTCTATG
GACATCGCAAAGGATAAACC

Downstream 100 bases:

>100_bases
CCATGAGCGAAATAAAAGACATTGTTGTTCAGGGGTTATGGAAAAATAACTCTGCTCTGGTGCAGCTACTTGGCCTGTGC
CCTTTACTGGCAGTGACGTC

Product: electron transport complex protein RnfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHALFDQVLPPDRYNNNLQESCYLVDAPALGKGTHRVFI
ARKDDKPVAAIIEATAPDGYSGAIQLIVGADFNGTILGTRVTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAV
KKDGGDFDQFTGATITPRAVVNAVKRAGLYAESLPAQLPHLTACGE

Sequences:

>Translated_206_residues
MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHALFDQVLPPDRYNNNLQESCYLVDAPALGKGTHRVFI
ARKDDKPVAAIIEATAPDGYSGAIQLIVGADFNGTILGTRVTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAV
KKDGGDFDQFTGATITPRAVVNAVKRAGLYAESLPAQLPHLTACGE
>Mature_206_residues
MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHALFDQVLPPDRYNNNLQESCYLVDAPALGKGTHRVFI
ARKDDKPVAAIIEATAPDGYSGAIQLIVGADFNGTILGTRVTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAV
KKDGGDFDQFTGATITPRAVVNAVKRAGLYAESLPAQLPHLTACGE

Specific function: May be part of a membrane complex involved in electron transport

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cell inner membrane (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family

Homologues:

Organism=Escherichia coli, GI1787918, Length=206, Percent_Identity=84.4660194174757, Blast_Score=366, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFG_SALTI (Q8Z6Q7)

Other databases:

- EMBL:   AL627271
- EMBL:   AE014613
- RefSeq:   NP_456075.1
- RefSeq:   NP_805124.1
- GeneID:   1070748
- GeneID:   1248041
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t1323
- KEGG:   sty:STY1667
- HOGENOM:   HBG454413
- OMA:   GMFDQFT
- ProtClustDB:   PRK01908
- BioCyc:   SENT209261:T1323-MONOMER
- BioCyc:   SENT220341:STY1667-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00479
- InterPro:   IPR022989
- InterPro:   IPR010209
- InterPro:   IPR007329
- SMART:   SM00900
- TIGRFAMs:   TIGR01947

Pfam domain/function: PF04205 FMN_bind

EC number: NA

Molecular weight: Translated: 22252; Mature: 22252

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe50fb84)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHALFDQVLPPDRYNNNLQ
CCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ESCYLVDAPALGKGTHRVFIARKDDKPVAAIIEATAPDGYSGAIQLIVGADFNGTILGTR
CCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEECE
VTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAVKKDGGDFDQFTGATITPRAV
ECCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCCHHHCCCCCCCHHHH
VNAVKRAGLYAESLPAQLPHLTACGE
HHHHHHHCCCHHHCCCCCCCCCCCCH
>Mature Secondary Structure
MLKTIRKHGITLALFAAGSTGLTAVINQMTKSTIHEQALQQQHALFDQVLPPDRYNNNLQ
CCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ESCYLVDAPALGKGTHRVFIARKDDKPVAAIIEATAPDGYSGAIQLIVGADFNGTILGTR
CCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEECE
VTEHHETPGLGDKIERRLSDWITHFSGKTISGENDTHWAVKKDGGDFDQFTGATITPRAV
ECCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCCHHHCCCCCCCHHHH
VNAVKRAGLYAESLPAQLPHLTACGE
HHHHHHHCCCHHHCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504