Click here to switch to the map view.

The map label for this gene is ubiX [H]

Identifier: 29141023

GI number: 29141023

Start: 582541

End: 583110

Strand: Direct

Name: ubiX [H]

Synonym: t0508

Alternate gene names: 29141023

Gene position: 582541-583110 (Clockwise)

Preceding gene: 29141022

Following gene: 29141024

Centisome position: 12.16

GC content: 55.26

Gene sequence:

>570_bases
ATGAAACGACTCATTGTAGGTATTAGCGGCGCCAGCGGAGCGATTTATGGCGTGCGCTTATTACAAATTTTGCGCGATGT
CGATAGCGTGGAAACGCATCTGGTGATGAGCCAGGCGGCCCGGCAAACGCTGGCGCTGGAGACCCATTTTTCGCTGCGCG
AGGTGCAGGCGCTGGCCGATGTGACGCACGATGCGCGCGACATTGCCGCCAGCATTTCCTCCGGCTCTTACCCGACGGCA
GGAATGGTTATCCTGCCCTGTTCGATTAAAACGCTGTCGGGGATTGTCCACAGTTATACTGACGGACTGCTTACCCGCGC
GGCGGATGTGATATTAAAAGAGCGGCGACCTCTGGTGCTGTGTGTGCGCGAAACGCCGCTGCATATCGGGCATTTGCGTT
TAATGACCCAGGCCGCTGAGATAGGCGCGGTGATTATGCCGCCGGTTCCGGCTTTTTATCACCTTCCTCAGACGTTAGAT
GATGTTATAAATCAAACGGTTAACCGAGTGTTGGATCAATTTGACATCCCCCTTCCGCACGACCTTTTTGTTCGCTGGCA
GGGCGCATAG

Upstream 100 bases:

>100_bases
TTATGATAGGGATTCTTTTGTCATGGTATCTCTTCAGACCCACTTTGAGCCGGTTACGTAACACAGTGGGATGAACGGCG
CTCGTAAACGGTAAGAGGAC

Downstream 100 bases:

>100_bases
CGTTGTCTGTTTAGCGTGCATTATTGTCCCTGTTGCCCTGTTTCAGGGCAATTTTGTAACCGCGATCATATCCTCAACAT
TTAATTCGTTAAAAGCCGCC

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKRLIVGISGASGAIYGVRLLQILRDVDSVETHLVMSQAARQTLALETHFSLREVQALADVTHDARDIAASISSGSYPTA
GMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRPLVLCVRETPLHIGHLRLMTQAAEIGAVIMPPVPAFYHLPQTLD
DVINQTVNRVLDQFDIPLPHDLFVRWQGA

Sequences:

>Translated_189_residues
MKRLIVGISGASGAIYGVRLLQILRDVDSVETHLVMSQAARQTLALETHFSLREVQALADVTHDARDIAASISSGSYPTA
GMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRPLVLCVRETPLHIGHLRLMTQAAEIGAVIMPPVPAFYHLPQTLD
DVINQTVNRVLDQFDIPLPHDLFVRWQGA
>Mature_189_residues
MKRLIVGISGASGAIYGVRLLQILRDVDSVETHLVMSQAARQTLALETHFSLREVQALADVTHDARDIAASISSGSYPTA
GMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRPLVLCVRETPLHIGHLRLMTQAAEIGAVIMPPVPAFYHLPQTLD
DVINQTVNRVLDQFDIPLPHDLFVRWQGA

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl P-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=189, Percent_Identity=91.005291005291, Blast_Score=351, Evalue=2e-98,
Organism=Saccharomyces cerevisiae, GI6320746, Length=187, Percent_Identity=48.1283422459893, Blast_Score=177, Evalue=9e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 20691; Mature: 20691

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIVGISGASGAIYGVRLLQILRDVDSVETHLVMSQAARQTLALETHFSLREVQALAD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTHDARDIAASISSGSYPTAGMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRPLVL
HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
CVRETPLHIGHLRLMTQAAEIGAVIMPPVPAFYHLPQTLDDVINQTVNRVLDQFDIPLPH
EEECCCCCHHHHHHHHHHHHCCEEECCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCH
DLFVRWQGA
HHEEEEECC
>Mature Secondary Structure
MKRLIVGISGASGAIYGVRLLQILRDVDSVETHLVMSQAARQTLALETHFSLREVQALAD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTHDARDIAASISSGSYPTAGMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRPLVL
HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
CVRETPLHIGHLRLMTQAAEIGAVIMPPVPAFYHLPQTLDDVINQTVNRVLDQFDIPLPH
EEECCCCCHHHHHHHHHHHHCCEEECCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCH
DLFVRWQGA
HHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]