Definition Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome.
Accession NC_004631
Length 4,791,961

Click here to switch to the map view.

The map label for this gene is yaiV [H]

Identifier: 29140564

GI number: 29140564

Start: 23341

End: 24045

Strand: Direct

Name: yaiV [H]

Synonym: t0021

Alternate gene names: 29140564

Gene position: 23341-24045 (Clockwise)

Preceding gene: 29140563

Following gene: 29140565

Centisome position: 0.49

GC content: 46.38

Gene sequence:

>705_bases
ATGAAAAAAATGATGAACGACGCTTTTGCTAAAGATAATAATGAGAATTTATTACACTCTTTTCTTTTTTCTCAGCAGGC
TAAACCTCACGCGGCGATTGATGCCTTATTTTCGGCCTTGTTGCCATTTGGTCAACCGTTTACGCTGGGTATCGGCGATG
AGTTTTATTTACAGGCCAATGATGAACACTACATTGTATTACTGGAGTCAGGAATTGTTTCTTTCTGTCGTGATGACAAC
CGACTCCATATATCTTCATCGTTTGCGCCATCGGTCGTGGGTATGGTTGACAGCTATGGCGCTACCTATAACGTTCCCGC
GCGCCCGGAACACTTTTTGCTCGCAGAAACGGTTTGTAGCGGTAGATTTGTTCGCCTGCCGGATTTTATAAAAATCGCCG
ATGAATGCGATTTGTGGCACGACGTGGCCCGTTGTCTGGCTTACCGTCTGATGGTGATGAGCGCGCGCGATCGTGAATTA
GTCGGCGTCGATTCTTACCTGAAAGTTCGGGCGCTGCTGATTGAAATCTGGGCTTATCCACAGGCCTACCGGGAAAACAT
TATCGTATTGAATTTTATTCAACGGCGTACCGGGATATCGCGCAGTCGGACTATGAAGATTCTGTCTGAACTAAAAAAAG
GCGGGTATATCCATATTGATAATGGGCGGCTGACGGCACTCGGAAAACTGCCAGTGGCGTATTAA

Upstream 100 bases:

>100_bases
TTGTGAATACAGAAATACTGCATAGCGATGTTATTTATTATTAATTTAAGTACTTTTTGAGAGGTTATACTGTGGCGCTA
CATTGAGTAGACAACCGTTA

Downstream 100 bases:

>100_bases
TGCACTATACGCAACGATATATTTACATATCTCAACTGAATTTGCCTGTTATCGTTAATAAAATGTTTTATTGAAAATTG
TTAAGAAGATTATTTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKKMMNDAFAKDNNENLLHSFLFSQQAKPHAAIDALFSALLPFGQPFTLGIGDEFYLQANDEHYIVLLESGIVSFCRDDN
RLHISSSFAPSVVGMVDSYGATYNVPARPEHFLLAETVCSGRFVRLPDFIKIADECDLWHDVARCLAYRLMVMSARDREL
VGVDSYLKVRALLIEIWAYPQAYRENIIVLNFIQRRTGISRSRTMKILSELKKGGYIHIDNGRLTALGKLPVAY

Sequences:

>Translated_234_residues
MKKMMNDAFAKDNNENLLHSFLFSQQAKPHAAIDALFSALLPFGQPFTLGIGDEFYLQANDEHYIVLLESGIVSFCRDDN
RLHISSSFAPSVVGMVDSYGATYNVPARPEHFLLAETVCSGRFVRLPDFIKIADECDLWHDVARCLAYRLMVMSARDREL
VGVDSYLKVRALLIEIWAYPQAYRENIIVLNFIQRRTGISRSRTMKILSELKKGGYIHIDNGRLTALGKLPVAY
>Mature_234_residues
MKKMMNDAFAKDNNENLLHSFLFSQQAKPHAAIDALFSALLPFGQPFTLGIGDEFYLQANDEHYIVLLESGIVSFCRDDN
RLHISSSFAPSVVGMVDSYGATYNVPARPEHFLLAETVCSGRFVRLPDFIKIADECDLWHDVARCLAYRLMVMSARDREL
VGVDSYLKVRALLIEIWAYPQAYRENIIVLNFIQRRTGISRSRTMKILSELKKGGYIHIDNGRLTALGKLPVAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510929, Length=210, Percent_Identity=31.4285714285714, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26525; Mature: 26525

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMMNDAFAKDNNENLLHSFLFSQQAKPHAAIDALFSALLPFGQPFTLGIGDEFYLQAN
CCCHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEEC
DEHYIVLLESGIVSFCRDDNRLHISSSFAPSVVGMVDSYGATYNVPARPEHFLLAETVCS
CCEEEEEEECCHHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHC
GRFVRLPDFIKIADECDLWHDVARCLAYRLMVMSARDRELVGVDSYLKVRALLIEIWAYP
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCC
QAYRENIIVLNFIQRRTGISRSRTMKILSELKKGGYIHIDNGRLTALGKLPVAY
HHHHCCEEEEEEHHHHCCCCHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCC
>Mature Secondary Structure
MKKMMNDAFAKDNNENLLHSFLFSQQAKPHAAIDALFSALLPFGQPFTLGIGDEFYLQAN
CCCHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEEC
DEHYIVLLESGIVSFCRDDNRLHISSSFAPSVVGMVDSYGATYNVPARPEHFLLAETVCS
CCEEEEEEECCHHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHC
GRFVRLPDFIKIADECDLWHDVARCLAYRLMVMSARDRELVGVDSYLKVRALLIEIWAYP
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCC
QAYRENIIVLNFIQRRTGISRSRTMKILSELKKGGYIHIDNGRLTALGKLPVAY
HHHHCCEEEEEEHHHHCCCCHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]