Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572839

Identifier: 28572839

GI number: 28572839

Start: 791029

End: 791394

Strand: Direct

Name: 28572839

Synonym: TW698

Alternate gene names: NA

Gene position: 791029-791394 (Clockwise)

Preceding gene: 28572838

Following gene: 28572840

Centisome position: 85.43

GC content: 45.08

Gene sequence:

>366_bases
GTGAATACAATTTCAAACAGATATAGCAAGCCACTATCAAGAGGCATAAAAATTGGTGCATCCGTAGTGGCGCTTTGTGT
ATCCGTTCTTCTGATTGCAATCTTCAGCCTGATGACTCGTCCAATTGGGAATGATTATCACACAACTTCCTTTAAGGTCA
AAAGTGATAATGAAGTTATCGTTGAGTTTAGTTTCACCGGCCATATCCCAACGGTTTGTGCCGTAAGGGTCCTCGGGCGT
GATATGTCGACCGTTGGATGGAAGGTTGTTCCTGTGCTGTCGCCACATATGGAGGTGGGGTTGAGAACCACTAAGGTGGC
TCATCATGCAGAAATTGAGAGCTGTAGGAGGATATATGCCGAATGA

Upstream 100 bases:

>100_bases
TGAAACAGGGATTATAAACACAATACATATGAGGTCGTAGTATCCTCGTCATCGTGTCAATTTGTAACACATCAACACAG
AGTGTAAGTGCGCACTAAAG

Downstream 100 bases:

>100_bases
TTCTGAAACATGGCTCAGTAAGGAAGCGCATAGTGTGCTTGTTGTTGAACTCGAGGAATTGGTTACAACAGGGCGCAAGG
AAATTGCAAAACGTATTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MNTISNRYSKPLSRGIKIGASVVALCVSVLLIAIFSLMTRPIGNDYHTTSFKVKSDNEVIVEFSFTGHIPTVCAVRVLGR
DMSTVGWKVVPVLSPHMEVGLRTTKVAHHAEIESCRRIYAE

Sequences:

>Translated_121_residues
MNTISNRYSKPLSRGIKIGASVVALCVSVLLIAIFSLMTRPIGNDYHTTSFKVKSDNEVIVEFSFTGHIPTVCAVRVLGR
DMSTVGWKVVPVLSPHMEVGLRTTKVAHHAEIESCRRIYAE
>Mature_121_residues
MNTISNRYSKPLSRGIKIGASVVALCVSVLLIAIFSLMTRPIGNDYHTTSFKVKSDNEVIVEFSFTGHIPTVCAVRVLGR
DMSTVGWKVVPVLSPHMEVGLRTTKVAHHAEIESCRRIYAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13358; Mature: 13358

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTISNRYSKPLSRGIKIGASVVALCVSVLLIAIFSLMTRPIGNDYHTTSFKVKSDNEVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEE
VEFSFTGHIPTVCAVRVLGRDMSTVGWKVVPVLSPHMEVGLRTTKVAHHAEIESCRRIYA
EEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHC
E
C
>Mature Secondary Structure
MNTISNRYSKPLSRGIKIGASVVALCVSVLLIAIFSLMTRPIGNDYHTTSFKVKSDNEVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEE
VEFSFTGHIPTVCAVRVLGRDMSTVGWKVVPVLSPHMEVGLRTTKVAHHAEIESCRRIYA
EEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA