| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is 28572762
Identifier: 28572762
GI number: 28572762
Start: 702163
End: 702450
Strand: Reverse
Name: 28572762
Synonym: TW616
Alternate gene names: NA
Gene position: 702450-702163 (Counterclockwise)
Preceding gene: 28572763
Following gene: 28572761
Centisome position: 75.86
GC content: 44.44
Gene sequence:
>288_bases TTGCCACACAGTTATGTACAGGGACATATCCAGATAACAGCGCAATATCCAGTCAACAGGGCAAAAAACAATACTGTGTT ACCTAACAACAATGGATATACACGGGAAGTGGTAACCCAAACCAGTCATACAAACCAGTCACGGGGCATGTCACAGAGTG CTGTCAACCTAATCATTACTGCTTTGGGTAAGTCATCATCTACCACACAGACATGGATTGTCCTAACCGTAGGTGCAGGT AAGTGTATAGACAGACAGAGCCAACTGCAGTTACAGAGTAACCGGTAA
Upstream 100 bases:
>100_bases CCTTTAAGGGCATCTTATAAACATTTAATTCAAAGGATTACCCGTTTTGTGTCAGTTGTGACGGATTCGCTACACTCATT TCGAAGTAGATACACACTCT
Downstream 100 bases:
>100_bases CCTGTGTTGCGTAACATGTTACTCACCTGCGCAACTGGTACCCGCTTGTGCTGTGTTACGTGATTACCCCTGTTGCGTTA CATGTCACACGCACGCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MPHSYVQGHIQITAQYPVNRAKNNTVLPNNNGYTREVVTQTSHTNQSRGMSQSAVNLIITALGKSSSTTQTWIVLTVGAG KCIDRQSQLQLQSNR
Sequences:
>Translated_95_residues MPHSYVQGHIQITAQYPVNRAKNNTVLPNNNGYTREVVTQTSHTNQSRGMSQSAVNLIITALGKSSSTTQTWIVLTVGAG KCIDRQSQLQLQSNR >Mature_94_residues PHSYVQGHIQITAQYPVNRAKNNTVLPNNNGYTREVVTQTSHTNQSRGMSQSAVNLIITALGKSSSTTQTWIVLTVGAGK CIDRQSQLQLQSNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10440; Mature: 10309
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSYVQGHIQITAQYPVNRAKNNTVLPNNNGYTREVVTQTSHTNQSRGMSQSAVNLIIT CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHEEEEE ALGKSSSTTQTWIVLTVGAGKCIDRQSQLQLQSNR ECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCC >Mature Secondary Structure PHSYVQGHIQITAQYPVNRAKNNTVLPNNNGYTREVVTQTSHTNQSRGMSQSAVNLIIT CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHEEEEE ALGKSSSTTQTWIVLTVGAGKCIDRQSQLQLQSNR ECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA