| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is bcp [C]
Identifier: 28572663
GI number: 28572663
Start: 552783
End: 553241
Strand: Reverse
Name: bcp [C]
Synonym: TW514
Alternate gene names: 28572663
Gene position: 553241-552783 (Counterclockwise)
Preceding gene: 28572669
Following gene: 28572662
Centisome position: 59.75
GC content: 48.15
Gene sequence:
>459_bases GTGTCTAACCAGGTTTTACCTAAAGGAAGTTTTGCCCCGGACTTCGAGCTTGTTGATCAAAACGGAGCGACGGTTGTTCT TTCTGAAGTTGCTGCTAAGAAGGATGTTGTTCTGTTCTTTTTCCCGCTTGCGTTCAGCGGGATTTGCACTGATGAGCTCA TTCAAGTACGTGACAGTCTAGATTCTTTCAAGTCGTTTGAGGTTTTTGCCCTTTCCGTTGACTCTAAGTTTACGCTCAGG GCGTATTCTGAGTCGCAGGGGTTTTCCTTCGCGCTGCTCAGTGATTTTTGGCCCCATGGGGGAGTTGCAAAGCAGTTCGG TGCTTTCCTCGAAGATGTGGGCGTGGCCTCGAGAAGTACCTTTATCGTGGGTAGAGATCTGAAGATAAAGGCTTCGTTTT TTTCAGGCATCCACGAACCTAGAGATTTTTCTGAGATAAGGGCTGCCCTGGCTTCCTAG
Upstream 100 bases:
>100_bases GGCATAGTGTCTCGCTAAAACTCTACCAGGGTATAATTGTTGTGCACCGCAGGCGGAGTCTGCATTCCGGGCTTCTCTGG CGTGGATTTTGGGAGGGATC
Downstream 100 bases:
>100_bases GGCGGGCCTTGCGCCTCCTGGGCGTATTTTCTGGATGCGTGGTGTGTATCTGCTTCATCGTGATTGGGCCTTTAGCTCAG CTGGCTAGAGCGCCACGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSNQVLPKGSFAPDFELVDQNGATVVLSEVAAKKDVVLFFFPLAFSGICTDELIQVRDSLDSFKSFEVFALSVDSKFTLR AYSESQGFSFALLSDFWPHGGVAKQFGAFLEDVGVASRSTFIVGRDLKIKASFFSGIHEPRDFSEIRAALAS
Sequences:
>Translated_152_residues MSNQVLPKGSFAPDFELVDQNGATVVLSEVAAKKDVVLFFFPLAFSGICTDELIQVRDSLDSFKSFEVFALSVDSKFTLR AYSESQGFSFALLSDFWPHGGVAKQFGAFLEDVGVASRSTFIVGRDLKIKASFFSGIHEPRDFSEIRAALAS >Mature_151_residues SNQVLPKGSFAPDFELVDQNGATVVLSEVAAKKDVVLFFFPLAFSGICTDELIQVRDSLDSFKSFEVFALSVDSKFTLRA YSESQGFSFALLSDFWPHGGVAKQFGAFLEDVGVASRSTFIVGRDLKIKASFFSGIHEPRDFSEIRAALAS
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16635; Mature: 16504
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQVLPKGSFAPDFELVDQNGATVVLSEVAAKKDVVLFFFPLAFSGICTDELIQVRDSL CCCCCCCCCCCCCCCEEECCCCCEEEEEHHHCCCCEEEEEECHHHCCCCHHHHHHHHHHH DSFKSFEVFALSVDSKFTLRAYSESQGFSFALLSDFWPHGGVAKQFGAFLEDVGVASRST HHHCCEEEEEEEECCEEEEEEECCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCE FIVGRDLKIKASFFSGIHEPRDFSEIRAALAS EEECCCCEEEEHHHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure SNQVLPKGSFAPDFELVDQNGATVVLSEVAAKKDVVLFFFPLAFSGICTDELIQVRDSL CCCCCCCCCCCCCCEEECCCCCEEEEEHHHCCCCEEEEEECHHHCCCCHHHHHHHHHHH DSFKSFEVFALSVDSKFTLRAYSESQGFSFALLSDFWPHGGVAKQFGAFLEDVGVASRST HHHCCEEEEEEEECCEEEEEEECCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCE FIVGRDLKIKASFFSGIHEPRDFSEIRAALAS EEECCCCEEEEHHHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]