Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is bcp [C]

Identifier: 28572663

GI number: 28572663

Start: 552783

End: 553241

Strand: Reverse

Name: bcp [C]

Synonym: TW514

Alternate gene names: 28572663

Gene position: 553241-552783 (Counterclockwise)

Preceding gene: 28572669

Following gene: 28572662

Centisome position: 59.75

GC content: 48.15

Gene sequence:

>459_bases
GTGTCTAACCAGGTTTTACCTAAAGGAAGTTTTGCCCCGGACTTCGAGCTTGTTGATCAAAACGGAGCGACGGTTGTTCT
TTCTGAAGTTGCTGCTAAGAAGGATGTTGTTCTGTTCTTTTTCCCGCTTGCGTTCAGCGGGATTTGCACTGATGAGCTCA
TTCAAGTACGTGACAGTCTAGATTCTTTCAAGTCGTTTGAGGTTTTTGCCCTTTCCGTTGACTCTAAGTTTACGCTCAGG
GCGTATTCTGAGTCGCAGGGGTTTTCCTTCGCGCTGCTCAGTGATTTTTGGCCCCATGGGGGAGTTGCAAAGCAGTTCGG
TGCTTTCCTCGAAGATGTGGGCGTGGCCTCGAGAAGTACCTTTATCGTGGGTAGAGATCTGAAGATAAAGGCTTCGTTTT
TTTCAGGCATCCACGAACCTAGAGATTTTTCTGAGATAAGGGCTGCCCTGGCTTCCTAG

Upstream 100 bases:

>100_bases
GGCATAGTGTCTCGCTAAAACTCTACCAGGGTATAATTGTTGTGCACCGCAGGCGGAGTCTGCATTCCGGGCTTCTCTGG
CGTGGATTTTGGGAGGGATC

Downstream 100 bases:

>100_bases
GGCGGGCCTTGCGCCTCCTGGGCGTATTTTCTGGATGCGTGGTGTGTATCTGCTTCATCGTGATTGGGCCTTTAGCTCAG
CTGGCTAGAGCGCCACGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Thioredoxin reductase [H]

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSNQVLPKGSFAPDFELVDQNGATVVLSEVAAKKDVVLFFFPLAFSGICTDELIQVRDSLDSFKSFEVFALSVDSKFTLR
AYSESQGFSFALLSDFWPHGGVAKQFGAFLEDVGVASRSTFIVGRDLKIKASFFSGIHEPRDFSEIRAALAS

Sequences:

>Translated_152_residues
MSNQVLPKGSFAPDFELVDQNGATVVLSEVAAKKDVVLFFFPLAFSGICTDELIQVRDSLDSFKSFEVFALSVDSKFTLR
AYSESQGFSFALLSDFWPHGGVAKQFGAFLEDVGVASRSTFIVGRDLKIKASFFSGIHEPRDFSEIRAALAS
>Mature_151_residues
SNQVLPKGSFAPDFELVDQNGATVVLSEVAAKKDVVLFFFPLAFSGICTDELIQVRDSLDSFKSFEVFALSVDSKFTLRA
YSESQGFSFALLSDFWPHGGVAKQFGAFLEDVGVASRSTFIVGRDLKIKASFFSGIHEPRDFSEIRAALAS

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 16635; Mature: 16504

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQVLPKGSFAPDFELVDQNGATVVLSEVAAKKDVVLFFFPLAFSGICTDELIQVRDSL
CCCCCCCCCCCCCCCEEECCCCCEEEEEHHHCCCCEEEEEECHHHCCCCHHHHHHHHHHH
DSFKSFEVFALSVDSKFTLRAYSESQGFSFALLSDFWPHGGVAKQFGAFLEDVGVASRST
HHHCCEEEEEEEECCEEEEEEECCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCE
FIVGRDLKIKASFFSGIHEPRDFSEIRAALAS
EEECCCCEEEEHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SNQVLPKGSFAPDFELVDQNGATVVLSEVAAKKDVVLFFFPLAFSGICTDELIQVRDSL
CCCCCCCCCCCCCCEEECCCCCEEEEEHHHCCCCEEEEEECHHHCCCCHHHHHHHHHHH
DSFKSFEVFALSVDSKFTLRAYSESQGFSFALLSDFWPHGGVAKQFGAFLEDVGVASRST
HHHCCEEEEEEEECCEEEEEEECCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCE
FIVGRDLKIKASFFSGIHEPRDFSEIRAALAS
EEECCCCEEEEHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]