Click here to switch to the map view.

The map label for this gene is 28572543

Identifier: 28572543

GI number: 28572543

Start: 424690

End: 425814

Strand: Reverse

Name: 28572543

Synonym: TW390

Alternate gene names: NA

Gene position: 425814-424690 (Counterclockwise)

Preceding gene: 28572544

Following gene: 28572536

Centisome position: 45.99

GC content: 47.64

Gene sequence:

>1125_bases
TTGCCAGGGGTTCTCGTACATCATCTCTCTATGAGTGCGGAAAAGCGTAGATCTATTACATTGATCACCCCATCTGATTT
GGATCCAATAAGCATTGCGGCTGCAGTTGGTACCCTTTCCTTGAGGCGGATTGATGTCTGTTATACACCAGACCAGAAGC
TCGCATTTGACCACAGGTTAGCCGATATACAGTATCAAATTGGGTATGGTTATGTTCCGGTCAGGTCAACTTCCTGTTGG
CTCTGGACCGGGAGGGCACTTCCCGAGTCGCATGAGGCGGCGATTCTATCTTCAACTCGGCGAATGGTTACCCCGCAGGG
ATGGAATATCGATAATCCACTCTCGCCACACTATTCATTCCTGACCTGTGGACCAATGGAGGTTCTGTCACCGCTCTCAA
CAGCTCTTAGCATAATGCTTGTTCATCCTAGTAAATTGACAATCTGTGATATGCGGGGCCTTGCGTGCTTGATCGACTCG
GAACTTGTGACGGTTACCATGACCAAGGCGGCAATAAACCGACTCGACAGAAAAGAGCGCACGCGTGCGAGGGCTATCTG
GAACGATTGCAACCGGCATATTGATAACCTGCTTATTAACCGCAAGGATGAGTTTGATACCTGCTTTGCGGAGTTGTTAA
AGGAAGCAGCGCGGAGAAACCTGGACAAGAGAAACTCGAGGGTTCAAGCTCTGCAGGCTGAATTGGGTGCTACTGAGAGC
AAGTACCGTGATTGTTCGGCTATGTGTGATAGGATGCTCAACCATTTCGAAATTGCCCGCAGTCGTTGTGAGTTGCAAAA
GGGAAGTGTTGAAAGTGCACGACTCGGCAATGCGATTAAGCTTTTAAACCTGCAAGGGACCGCAATAAAGAGAATGAAGA
TTGCCGAAAAGATACGCCTCAAAATCCTTATTTCTGAAGAAATCGGTAATGTGTCATTTATGAAAACCTCCCATCTACAG
GATGTTGAAAGAATAATTAAGGCTCTTACCTCGAAATACAGTAGGCTGAACTTTGAGATTGAACGGGTTGCGAGAGATCT
GGCAGCGGGGCATGAGAGCTCTGACTGTAAGTGCATTGATCCGGACGATATGCGATCTCTTGTAGTGGATAGGGTACTGT
TGTGA

Upstream 100 bases:

>100_bases
TGAAAAAATAAAAAATGAGATCGGAAAAACTAAGAGTTTTATCGATATTATAAAATGAACTTTTACCTGGTTATAAGGTA
TTTTTCAAAAATAATTTGAC

Downstream 100 bases:

>100_bases
GTTTGGAACCACTTGCCAGACTTTTGTGCTCTTCACAGCTTTGTCAGGTGAGGTAGTCTCTGTTTTAGAGACCCTTAGCC
TTTAAGAACCCCCAGTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MPGVLVHHLSMSAEKRRSITLITPSDLDPISIAAAVGTLSLRRIDVCYTPDQKLAFDHRLADIQYQIGYGYVPVRSTSCW
LWTGRALPESHEAAILSSTRRMVTPQGWNIDNPLSPHYSFLTCGPMEVLSPLSTALSIMLVHPSKLTICDMRGLACLIDS
ELVTVTMTKAAINRLDRKERTRARAIWNDCNRHIDNLLINRKDEFDTCFAELLKEAARRNLDKRNSRVQALQAELGATES
KYRDCSAMCDRMLNHFEIARSRCELQKGSVESARLGNAIKLLNLQGTAIKRMKIAEKIRLKILISEEIGNVSFMKTSHLQ
DVERIIKALTSKYSRLNFEIERVARDLAAGHESSDCKCIDPDDMRSLVVDRVLL

Sequences:

>Translated_374_residues
MPGVLVHHLSMSAEKRRSITLITPSDLDPISIAAAVGTLSLRRIDVCYTPDQKLAFDHRLADIQYQIGYGYVPVRSTSCW
LWTGRALPESHEAAILSSTRRMVTPQGWNIDNPLSPHYSFLTCGPMEVLSPLSTALSIMLVHPSKLTICDMRGLACLIDS
ELVTVTMTKAAINRLDRKERTRARAIWNDCNRHIDNLLINRKDEFDTCFAELLKEAARRNLDKRNSRVQALQAELGATES
KYRDCSAMCDRMLNHFEIARSRCELQKGSVESARLGNAIKLLNLQGTAIKRMKIAEKIRLKILISEEIGNVSFMKTSHLQ
DVERIIKALTSKYSRLNFEIERVARDLAAGHESSDCKCIDPDDMRSLVVDRVLL
>Mature_373_residues
PGVLVHHLSMSAEKRRSITLITPSDLDPISIAAAVGTLSLRRIDVCYTPDQKLAFDHRLADIQYQIGYGYVPVRSTSCWL
WTGRALPESHEAAILSSTRRMVTPQGWNIDNPLSPHYSFLTCGPMEVLSPLSTALSIMLVHPSKLTICDMRGLACLIDSE
LVTVTMTKAAINRLDRKERTRARAIWNDCNRHIDNLLINRKDEFDTCFAELLKEAARRNLDKRNSRVQALQAELGATESK
YRDCSAMCDRMLNHFEIARSRCELQKGSVESARLGNAIKLLNLQGTAIKRMKIAEKIRLKILISEEIGNVSFMKTSHLQD
VERIIKALTSKYSRLNFEIERVARDLAAGHESSDCKCIDPDDMRSLVVDRVLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42193; Mature: 42062

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGVLVHHLSMSAEKRRSITLITPSDLDPISIAAAVGTLSLRRIDVCYTPDQKLAFDHRL
CCCEEEEHHCCCHHHCCEEEEECCCCCCHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHH
ADIQYQIGYGYVPVRSTSCWLWTGRALPESHEAAILSSTRRMVTPQGWNIDNPLSPHYSF
EEEEEEECCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
LTCGPMEVLSPLSTALSIMLVHPSKLTICDMRGLACLIDSELVTVTMTKAAINRLDRKER
EECCHHHHHHHHHHHHEEEEECCCCEEEECCCCCEEEECCCEEEEEEHHHHHHHHHHHHH
TRARAIWNDCNRHIDNLLINRKDEFDTCFAELLKEAARRNLDKRNSRVQALQAELGATES
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHH
KYRDCSAMCDRMLNHFEIARSRCELQKGSVESARLGNAIKLLNLQGTAIKRMKIAEKIRL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCHHHHHHHHHHHHEE
KILISEEIGNVSFMKTSHLQDVERIIKALTSKYSRLNFEIERVARDLAAGHESSDCKCID
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEECC
PDDMRSLVVDRVLL
HHHHHHHHHHHHCC
>Mature Secondary Structure 
PGVLVHHLSMSAEKRRSITLITPSDLDPISIAAAVGTLSLRRIDVCYTPDQKLAFDHRL
CCEEEEHHCCCHHHCCEEEEECCCCCCHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHH
ADIQYQIGYGYVPVRSTSCWLWTGRALPESHEAAILSSTRRMVTPQGWNIDNPLSPHYSF
EEEEEEECCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
LTCGPMEVLSPLSTALSIMLVHPSKLTICDMRGLACLIDSELVTVTMTKAAINRLDRKER
EECCHHHHHHHHHHHHEEEEECCCCEEEECCCCCEEEECCCEEEEEEHHHHHHHHHHHHH
TRARAIWNDCNRHIDNLLINRKDEFDTCFAELLKEAARRNLDKRNSRVQALQAELGATES
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHH
KYRDCSAMCDRMLNHFEIARSRCELQKGSVESARLGNAIKLLNLQGTAIKRMKIAEKIRL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCHHHHHHHHHHHHEE
KILISEEIGNVSFMKTSHLQDVERIIKALTSKYSRLNFEIERVARDLAAGHESSDCKCID
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEECC
PDDMRSLVVDRVLL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA