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The map label for this gene is 28572542

Identifier: 28572542

GI number: 28572542

Start: 423503

End: 424432

Strand: Direct

Name: 28572542

Synonym: TW389

Alternate gene names: NA

Gene position: 423503-424432 (Clockwise)

Preceding gene: 28572541

Following gene: 28572545

Centisome position: 45.74

GC content: 47.63

Gene sequence:

>930_bases
ATGAGTATTGACCCTCTTGTTTTGTTATCAGGTAAATGCGAGTACTCGGCCAATGAGGCTATTGCTAGCATAAGGAAAAA
GATAACAGATTCCCTGTCAGCGCCCGAGGTTCATGTAATCTATGCGGACAATTATTCCGCGGGCGAGTTGCACCGATTGG
CATCACCTTCTTTGTTGTTTTCTCCAAGACTTGTAATCGTAAAACAAGTCGAGGAGTGTAACGATATTTTCCTTGATGAA
GCTATGTCCTACATACAAGATCCTTTTAAGGATACGTGTGTTGTGTTTAGGCACAAGTCTGGTATTCGGGGCAAAAGGCT
GCTCGGAGAGCTAAGAAATATAGGCGTAGAGATTGCCTGCCCTGATCTCACCCCGTCACGTTTTGTATCTGATTTTTTCA
AGAAGGAGAAGCGTAACATAACCCAAGCTGCTATTAACCTGCTCGTAGAATCTTTTGATGACATACCGGAGCTGGCTCAG
TTTTGTAAACAGATTATTTCCGATACCAAAGGCACCATCTCGGCCAAAGGCACCATCTCGGAATGTGAAATTGCTTTCCT
TTGCTGGTCTAGGCCTGGTGCATCAGTCTTCCGGGTGGTCGATGCGGCCATGAATGGCGACGAAGCTGCTACTGTACTGC
TTCTCAGTCGACTCCTTACAGAGGGTGGTAGTGCGATTCCCCTTGTTGCCGCCGCAAGCGCAAGACTCAGACTTCTTGTT
AAAGTGAAGTATGGCAAGAAGGTTACTGCTGCACCCTGGCAGATTGCACTTGCTAAAAAGCAGTTAGCACCCTGGACGAA
CAGTAGCTTCATGAGCTGTATTCTAGCTCTTCATGCGGCAGATCGTGCCCTGAAAAGCACGGCGGGGAATCCAAACTATT
TGGTGGAGCATGCCATGCGGCTTATCGCAAGAAGTGCCCGTCTGGACTGA

Upstream 100 bases:

>100_bases
TAACAGGGATAATTTTGAGATTCATAAGGAGCATGACTAATATCCATGGCATGTGGTTACTTGAAACATCGACTGATAGT
GTGCTTGGCGGTATCAGTCT

Downstream 100 bases:

>100_bases
GTTCTGTAACCGGTGATCTATCCGGCTATGAAGGGTAGGATACGCCGTAGAAACATTACCGGGCACACTACCATGCAGGA
AGCCCCACGATGTAACCCCT

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunit Delta; DNA Polymerase III; DNA-Directed DNA Polymerase III Subunit Delta; DNA Polymerase III Delta Subunit HolA; DNA Polymerase III Subunit Delta-Like Protein; LOW QUALITY PROTEIN DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSIDPLVLLSGKCEYSANEAIASIRKKITDSLSAPEVHVIYADNYSAGELHRLASPSLLFSPRLVIVKQVEECNDIFLDE
AMSYIQDPFKDTCVVFRHKSGIRGKRLLGELRNIGVEIACPDLTPSRFVSDFFKKEKRNITQAAINLLVESFDDIPELAQ
FCKQIISDTKGTISAKGTISECEIAFLCWSRPGASVFRVVDAAMNGDEAATVLLLSRLLTEGGSAIPLVAAASARLRLLV
KVKYGKKVTAAPWQIALAKKQLAPWTNSSFMSCILALHAADRALKSTAGNPNYLVEHAMRLIARSARLD

Sequences:

>Translated_309_residues
MSIDPLVLLSGKCEYSANEAIASIRKKITDSLSAPEVHVIYADNYSAGELHRLASPSLLFSPRLVIVKQVEECNDIFLDE
AMSYIQDPFKDTCVVFRHKSGIRGKRLLGELRNIGVEIACPDLTPSRFVSDFFKKEKRNITQAAINLLVESFDDIPELAQ
FCKQIISDTKGTISAKGTISECEIAFLCWSRPGASVFRVVDAAMNGDEAATVLLLSRLLTEGGSAIPLVAAASARLRLLV
KVKYGKKVTAAPWQIALAKKQLAPWTNSSFMSCILALHAADRALKSTAGNPNYLVEHAMRLIARSARLD
>Mature_308_residues
SIDPLVLLSGKCEYSANEAIASIRKKITDSLSAPEVHVIYADNYSAGELHRLASPSLLFSPRLVIVKQVEECNDIFLDEA
MSYIQDPFKDTCVVFRHKSGIRGKRLLGELRNIGVEIACPDLTPSRFVSDFFKKEKRNITQAAINLLVESFDDIPELAQF
CKQIISDTKGTISAKGTISECEIAFLCWSRPGASVFRVVDAAMNGDEAATVLLLSRLLTEGGSAIPLVAAASARLRLLVK
VKYGKKVTAAPWQIALAKKQLAPWTNSSFMSCILALHAADRALKSTAGNPNYLVEHAMRLIARSARLD

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 33827; Mature: 33695

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDPLVLLSGKCEYSANEAIASIRKKITDSLSAPEVHVIYADNYSAGELHRLASPSLLF
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCCHHH
SPRLVIVKQVEECNDIFLDEAMSYIQDPFKDTCVVFRHKSGIRGKRLLGELRNIGVEIAC
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHCCEEEEC
PDLTPSRFVSDFFKKEKRNITQAAINLLVESFDDIPELAQFCKQIISDTKGTISAKGTIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCC
ECEIAFLCWSRPGASVFRVVDAAMNGDEAATVLLLSRLLTEGGSAIPLVAAASARLRLLV
CCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCEEEEEE
KVKYGKKVTAAPWQIALAKKQLAPWTNSSFMSCILALHAADRALKSTAGNPNYLVEHAMR
EEECCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LIARSARLD
HHHHHHCCC
>Mature Secondary Structure 
SIDPLVLLSGKCEYSANEAIASIRKKITDSLSAPEVHVIYADNYSAGELHRLASPSLLF
CCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCCHHH
SPRLVIVKQVEECNDIFLDEAMSYIQDPFKDTCVVFRHKSGIRGKRLLGELRNIGVEIAC
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHCCEEEEC
PDLTPSRFVSDFFKKEKRNITQAAINLLVESFDDIPELAQFCKQIISDTKGTISAKGTIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCC
ECEIAFLCWSRPGASVFRVVDAAMNGDEAATVLLLSRLLTEGGSAIPLVAAASARLRLLV
CCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCEEEEEE
KVKYGKKVTAAPWQIALAKKQLAPWTNSSFMSCILALHAADRALKSTAGNPNYLVEHAMR
EEECCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LIARSARLD
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA