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The map label for this gene is 28572461

Identifier: 28572461

GI number: 28572461

Start: 342073

End: 342303

Strand: Direct

Name: 28572461

Synonym: TW305

Alternate gene names: NA

Gene position: 342073-342303 (Clockwise)

Preceding gene: 28572460

Following gene: 28572462

Centisome position: 36.94

GC content: 49.35

Gene sequence:

>231_bases
ATGACAGGAACAGCTATTGAGGCTCTCGTCCATTTGATTCGTGGGATTGTTCTAAATCCTGATGATGTTAGGGTTGAGGC
TTTTGAGGATGGCGTGCGCGTTTTTGTGCATCCTTCTGACTGCGGTCGAGTTATCGGGCGGCAGGGGAATACAGTAAAGG
CACTCAGGACAGTTGCCAGGGCACTAAATCGGGGTCCTTTCATGCTTGAAATAGTGTCCGACGAAGAATAG

Upstream 100 bases:

>100_bases
TTGCTGCCGGTGAGGCGACGCCTACTGTCTCAGACAGGCCTGATTTACCCTCCGTGAGCGATGCACCCCAGGATGTCCCT
GAAGATGTGAGAGGGCAGGC

Downstream 100 bases:

>100_bases
TGCTCCTTAGGGTTGGCGTCCTTCTTCGGCCCTATGGTTTGCATGGCGGTCTTTTTGTGTCTGTCACGACGGATTTGCCC
GATGTGCGCTTTGCGGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MTGTAIEALVHLIRGIVLNPDDVRVEAFEDGVRVFVHPSDCGRVIGRQGNTVKALRTVARALNRGPFMLEIVSDEE

Sequences:

>Translated_76_residues
MTGTAIEALVHLIRGIVLNPDDVRVEAFEDGVRVFVHPSDCGRVIGRQGNTVKALRTVARALNRGPFMLEIVSDEE
>Mature_75_residues
TGTAIEALVHLIRGIVLNPDDVRVEAFEDGVRVFVHPSDCGRVIGRQGNTVKALRTVARALNRGPFMLEIVSDEE

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8329; Mature: 8198

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTAIEALVHLIRGIVLNPDDVRVEAFEDGVRVFVHPSDCGRVIGRQGNTVKALRTVAR
CCCHHHHHHHHHHHCEECCCCCCEEEEECCCEEEEECCCHHHHHHCCCCCHHHHHHHHHH
ALNRGPFMLEIVSDEE
HHCCCCEEEEEECCCC
>Mature Secondary Structure 
TGTAIEALVHLIRGIVLNPDDVRVEAFEDGVRVFVHPSDCGRVIGRQGNTVKALRTVAR
CCHHHHHHHHHHHCEECCCCCCEEEEECCCEEEEECCCHHHHHHCCCCCHHHHHHHHHH
ALNRGPFMLEIVSDEE
HHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA