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The map label for this gene is 28572357

Identifier: 28572357

GI number: 28572357

Start: 235965

End: 236714

Strand: Reverse

Name: 28572357

Synonym: TW197

Alternate gene names: NA

Gene position: 236714-235965 (Counterclockwise)

Preceding gene: 28572395

Following gene: 28572354

Centisome position: 25.56

GC content: 48.27

Gene sequence:

>750_bases
ATGATCGCCAAACATACAAAAAGGGGCGTCAAATTTCCGCGAGGGGAACAGGCAAAACCGGCGTCAGGATGGTCGAGGAT
TGTCATGATATTTGGCGAACTATCGATGACCGCCGGGGTACTTGTTGGGATTTTCTATACCTGGGTTTTATATATAGACT
CACCCTTAACCGCATGGGAACAGGGCAATAGCGCAAACCTCACCGCTTCTCAGTTCATGCGCCACAGGTCCGACGCCACG
GAGACTATGCCGGTTACCGACAGGGTAAAGGATTATGAGGATATAGCAGTTTTGTTCGTTCCTCGTTTTGGAAACAAATA
CAAGCGGGTAATTAGAGAAACTACGGATGTTACGCGCGTTTTGAACAGCAAAACCGCTGGAGTTGGGCACTACCCGCATA
CCGCGCTACCTGGCACATCCGGTAACTTTGCTGTTGCAGCACATGAAGTTGGGTGGGGCGCGGCTTTTGGAAAATTGTCA
GAACTTCGGCTGGGTGACAAAATCTATGTTTTGACGCCAAAGGGTTGGTACATATACGCGTATCGGAGCAGTGAGTACGT
AAAACCCGATGGGGTGAATGTCCTGCGGCCTTTGCCACAGTCATTTGCTGTTCCAGACGAAACCTATATTATGACGATGA
CAACATGTAATCCACCATTCTCTGTAGCCGAGAGGCTTATCGCATATGCGGTTCTTGAAAAATGGCAAGCAGACGTACCA
CATGAAATAGTGAATATTGTAAACAGCTGA

Upstream 100 bases:

>100_bases
AAAGAAATCAGGATCGTTAGAATCCACTAAACAAATAGCCCGCGGTGCGAGATAATACCGTCTCGGTCAAATTACTGGCA
GTAACATTATTCAAGTGGGT

Downstream 100 bases:

>100_bases
TATGTATGCGTTCATATGGAGAATTCTCCCCGGATCTTTTTGGATTAAGCTACTGCAGGCATTGCTGTTACTGGTTATCC
TGTTCACAATTTTGTTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Sortase; Sortase-Like Protein; Peptidase; Sortase Family Protein LPXTG-Site Transpeptidase

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MIAKHTKRGVKFPRGEQAKPASGWSRIVMIFGELSMTAGVLVGIFYTWVLYIDSPLTAWEQGNSANLTASQFMRHRSDAT
ETMPVTDRVKDYEDIAVLFVPRFGNKYKRVIRETTDVTRVLNSKTAGVGHYPHTALPGTSGNFAVAAHEVGWGAAFGKLS
ELRLGDKIYVLTPKGWYIYAYRSSEYVKPDGVNVLRPLPQSFAVPDETYIMTMTTCNPPFSVAERLIAYAVLEKWQADVP
HEIVNIVNS

Sequences:

>Translated_249_residues
MIAKHTKRGVKFPRGEQAKPASGWSRIVMIFGELSMTAGVLVGIFYTWVLYIDSPLTAWEQGNSANLTASQFMRHRSDAT
ETMPVTDRVKDYEDIAVLFVPRFGNKYKRVIRETTDVTRVLNSKTAGVGHYPHTALPGTSGNFAVAAHEVGWGAAFGKLS
ELRLGDKIYVLTPKGWYIYAYRSSEYVKPDGVNVLRPLPQSFAVPDETYIMTMTTCNPPFSVAERLIAYAVLEKWQADVP
HEIVNIVNS
>Mature_249_residues
MIAKHTKRGVKFPRGEQAKPASGWSRIVMIFGELSMTAGVLVGIFYTWVLYIDSPLTAWEQGNSANLTASQFMRHRSDAT
ETMPVTDRVKDYEDIAVLFVPRFGNKYKRVIRETTDVTRVLNSKTAGVGHYPHTALPGTSGNFAVAAHEVGWGAAFGKLS
ELRLGDKIYVLTPKGWYIYAYRSSEYVKPDGVNVLRPLPQSFAVPDETYIMTMTTCNPPFSVAERLIAYAVLEKWQADVP
HEIVNIVNS

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27794; Mature: 27794

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKHTKRGVKFPRGEQAKPASGWSRIVMIFGELSMTAGVLVGIFYTWVLYIDSPLTAWE
CCCCCCCCCCCCCCCCCCCCCCCHHEEEHEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
QGNSANLTASQFMRHRSDATETMPVTDRVKDYEDIAVLFVPRFGNKYKRVIRETTDVTRV
CCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
LNSKTAGVGHYPHTALPGTSGNFAVAAHEVGWGAAFGKLSELRLGDKIYVLTPKGWYIYA
HHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHEECCCEEEEECCCCEEEEE
YRSSEYVKPDGVNVLRPLPQSFAVPDETYIMTMTTCNPPFSVAERLIAYAVLEKWQADVP
ECCCCCCCCCCCHHHHCCCHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC
HEIVNIVNS
HHHHHHHCC
>Mature Secondary Structure
MIAKHTKRGVKFPRGEQAKPASGWSRIVMIFGELSMTAGVLVGIFYTWVLYIDSPLTAWE
CCCCCCCCCCCCCCCCCCCCCCCHHEEEHEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
QGNSANLTASQFMRHRSDATETMPVTDRVKDYEDIAVLFVPRFGNKYKRVIRETTDVTRV
CCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
LNSKTAGVGHYPHTALPGTSGNFAVAAHEVGWGAAFGKLSELRLGDKIYVLTPKGWYIYA
HHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHEECCCEEEEECCCCEEEEE
YRSSEYVKPDGVNVLRPLPQSFAVPDETYIMTMTTCNPPFSVAERLIAYAVLEKWQADVP
ECCCCCCCCCCCHHHHCCCHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC
HEIVNIVNS
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA