| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is coaA [H]
Identifier: 28572319
GI number: 28572319
Start: 180517
End: 181272
Strand: Reverse
Name: coaA [H]
Synonym: TW156
Alternate gene names: 28572319
Gene position: 181272-180517 (Counterclockwise)
Preceding gene: 28572322
Following gene: 28572315
Centisome position: 19.58
GC content: 38.36
Gene sequence:
>756_bases TTGGGAATTGAAGTGTTCAAGAAAGATATAACAAAAACGTATACCGAAATGCTAAAGGATATACGAAAGAGGGTTAGGGA AAGAGGAAAGGTTGGCAAAAGTTTTATCATTGGCATAACAGGTTCTGTTGCTGCTGGTAAATCTACACTCGCAAGCGATC TAGCCAAAATGTTGGATGGGATAAGTGTTGAGGTTATATCAACTGACGGATATTTGTATCCAAATAAAATCCTGGAGCAA AAGGGGCTGATGCTTAAAAAGGGATTTCCTGAGTCGTATGATACCGCACACCTCGCATCACTTGTAAAAAATATTAAAGC TGGGGCAAAAACGATTGGGATAAGACAGTATGCACATCCGATCCATGATGTAACGGGGGTGATAAAAACTGTTAATAAGC CGGAAATATTAATCATTGAAGGGCTAAACGTTATGCGGCATCCGGTAAAAACAGTGGTTGACCTGGGTATTTATATTGAA GCACCGAAGAGATCTGTATTCAAATGGTATGTAAAAAGATTTTTTGAACTGAGGGCGCAACATGAGAAAAACACATATTT TCGAAAGTATGCGAATCTCCCCAGAAGACAGTGTATAAAAATGCTAAAACAAGTTTGGCGCGACGTAAACCGAAAAAACT TCACGGAAAATATTTTGCCAGTGAAACATACGGCAGACTTTATTGTGTATAAAAATCCGAGACATAAAATGACACTTTAC AGAAATGAAGCTAGCTCTTCTGGATTTCCTGTTTGA
Upstream 100 bases:
>100_bases TGCAAACACACCTGCAGTAGAGAGAGATGCGCTTCAATAATAACATACACTCAGACATATGTTCAAATCTATTAGATATG AATTTATATGAAAGAGTTAT
Downstream 100 bases:
>100_bases AAAAATCTGCTAAATGCGAGCAGGCGCGCTCCGCTTTCTCCGGATTTAAATCCTCGACCATAATACGGATAAGAGGTTCT GTGCCACTTGGACGAATTAC
Product: pantothenate kinase
Products: NA
Alternate protein names: Pantothenic acid kinase [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MGIEVFKKDITKTYTEMLKDIRKRVRERGKVGKSFIIGITGSVAAGKSTLASDLAKMLDGISVEVISTDGYLYPNKILEQ KGLMLKKGFPESYDTAHLASLVKNIKAGAKTIGIRQYAHPIHDVTGVIKTVNKPEILIIEGLNVMRHPVKTVVDLGIYIE APKRSVFKWYVKRFFELRAQHEKNTYFRKYANLPRRQCIKMLKQVWRDVNRKNFTENILPVKHTADFIVYKNPRHKMTLY RNEASSSGFPV
Sequences:
>Translated_251_residues MGIEVFKKDITKTYTEMLKDIRKRVRERGKVGKSFIIGITGSVAAGKSTLASDLAKMLDGISVEVISTDGYLYPNKILEQ KGLMLKKGFPESYDTAHLASLVKNIKAGAKTIGIRQYAHPIHDVTGVIKTVNKPEILIIEGLNVMRHPVKTVVDLGIYIE APKRSVFKWYVKRFFELRAQHEKNTYFRKYANLPRRQCIKMLKQVWRDVNRKNFTENILPVKHTADFIVYKNPRHKMTLY RNEASSSGFPV >Mature_250_residues GIEVFKKDITKTYTEMLKDIRKRVRERGKVGKSFIIGITGSVAAGKSTLASDLAKMLDGISVEVISTDGYLYPNKILEQK GLMLKKGFPESYDTAHLASLVKNIKAGAKTIGIRQYAHPIHDVTGVIKTVNKPEILIIEGLNVMRHPVKTVVDLGIYIEA PKRSVFKWYVKRFFELRAQHEKNTYFRKYANLPRRQCIKMLKQVWRDVNRKNFTENILPVKHTADFIVYKNPRHKMTLYR NEASSSGFPV
Specific function: Coenzyme A (CoA) biosynthesis; first step. [C]
COG id: COG1072
COG function: function code H; Panthothenate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic pantothenate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790409, Length=219, Percent_Identity=41.0958904109589, Blast_Score=162, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004566 - InterPro: IPR006083 [H]
Pfam domain/function: PF00485 PRK [H]
EC number: =2.7.1.33 [H]
Molecular weight: Translated: 28757; Mature: 28626
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEVFKKDITKTYTEMLKDIRKRVRERGKVGKSFIIGITGSVAAGKSTLASDLAKMLDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCC ISVEVISTDGYLYPNKILEQKGLMLKKGFPESYDTAHLASLVKNIKAGAKTIGIRQYAHP CEEEEEECCCEECHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IHDVTGVIKTVNKPEILIIEGLNVMRHPVKTVVDLGIYIEAPKRSVFKWYVKRFFELRAQ HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH HEKNTYFRKYANLPRRQCIKMLKQVWRDVNRKNFTENILPVKHTADFIVYKNPRHKMTLY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEECCCCCEEEE RNEASSSGFPV ECCCCCCCCCC >Mature Secondary Structure GIEVFKKDITKTYTEMLKDIRKRVRERGKVGKSFIIGITGSVAAGKSTLASDLAKMLDG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCC ISVEVISTDGYLYPNKILEQKGLMLKKGFPESYDTAHLASLVKNIKAGAKTIGIRQYAHP CEEEEEECCCEECHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IHDVTGVIKTVNKPEILIIEGLNVMRHPVKTVVDLGIYIEAPKRSVFKWYVKRFFELRAQ HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH HEKNTYFRKYANLPRRQCIKMLKQVWRDVNRKNFTENILPVKHTADFIVYKNPRHKMTLY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEECCCCCEEEE RNEASSSGFPV ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA