| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is guaB2
Identifier: 28572254
GI number: 28572254
Start: 84872
End: 85993
Strand: Direct
Name: guaB2
Synonym: TW086
Alternate gene names: NA
Gene position: 84872-85993 (Clockwise)
Preceding gene: 28572253
Following gene: 28572255
Centisome position: 9.17
GC content: 50.18
Gene sequence:
>1122_bases ATGGAAGTCGGTTTTTCCAGAAATGCCAGAAGAGCTTTTTCGCTCGATGAAGTTGCTGTTGTTCCGAGCAGGCGTACCCG TCACTCTAGTGAGGTATCAATCGAGTGGAAGATGGATGCTTTCTCTTTTGACACACCGATTATTTCTTCTCCAGCGGACT CTGTTGTCTCACCAAGCACGATTGTTGAACTGTCCGAATTTGGCTGTCTTGGTATTTTGGATCTCGAAGGTGTTTGGACA CGTTACGAGAATCCAGAACCTGTCCTGCGCGAGATTTCTGCACTGCCGGAGGAAAAAGCGTGTCTTGGCCTTCAGAAAAT ATACTCGGAGCCAATTAAACGGCACCTACTGGAAAGGCGCTTGCAGGAGCTTCGCGATGCAGGGGTGATTGTTGCAGGTT GCCTTTCTCCGCAAACCACAAATGCGCTTTACAAGAGTGTAATCTCAGCGGGCGTAGATATTTTTGTCATTCGTGGGGGC ACTGTATCCGCTGAACATGTTTCAAAGAGTGACAATGTTCTAAACCTGAAGAGGTTTATATACGAGCTAGATGTTCCAGT TATGGTGGGCGGTGTTGCAACCTATACTGCGGCCTTGCACATGATGCGCACCGGCGCGGCCGGGGTTTTGGTCGGTTTTG GCGGATGCGCAGGATCAACGAACCATGCTTCACTTGGAATAAAGGTGCCTATGGCAACTGCAATAGCAGATGTTGCAGCG GCAAGAAAAGATTATTTGGATGAATCTGGAGGGCGATATGTTCAAGTAATTGCCGACGGGAGCATGAACACCAGCGGTAT GGCTGTGAATGCATTAGCTCTCGGTGCTGATGCGGTAATGATGGGAACTCCACTTGTACGCTCGACAACCTCTCCGGGAT TCGGGTACCACTGGGGTAGAGAGGCCCATCACATGACTTTACCGAGGGGTCGACGCGCCTACATAGGGCAAACTGCCTCT TTGCAGGAGATTATCCAGGGCCCGGGACATTCCCCAGATGGAACGGTAAATTTTGCAGGAGCAATTCGACGAGCGGTTGC ACTGGCTGGCTTTCAAGATCTGAAGAATTTTCAGCGGGTCGAGATGGTTGTTATACAGGACCAACGACGGTGTTGTGCCT AA
Upstream 100 bases:
>100_bases AAAGGTCGGTTTGTAAGAATCACCTCAGCTGGACTAAAAGAGTCACATCCGCATGATATTGAAATGATTGTCGAAACCCC AAACTACAGAACGTAGACTT
Downstream 100 bases:
>100_bases GGCATATTTCAAGCTCTCCAGTCTATTACTCCTGGCGCCATTTCTTGTGGTTTCATTTTGTTTTGTTTACCTTGGGTTTT GGCAACTTTCGCGCTCATAT
Product: inosine 5-monophosphate dehydrogenase
Products: xanthosine 5'-phosphate; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MEVGFSRNARRAFSLDEVAVVPSRRTRHSSEVSIEWKMDAFSFDTPIISSPADSVVSPSTIVELSEFGCLGILDLEGVWT RYENPEPVLREISALPEEKACLGLQKIYSEPIKRHLLERRLQELRDAGVIVAGCLSPQTTNALYKSVISAGVDIFVIRGG TVSAEHVSKSDNVLNLKRFIYELDVPVMVGGVATYTAALHMMRTGAAGVLVGFGGCAGSTNHASLGIKVPMATAIADVAA ARKDYLDESGGRYVQVIADGSMNTSGMAVNALALGADAVMMGTPLVRSTTSPGFGYHWGREAHHMTLPRGRRAYIGQTAS LQEIIQGPGHSPDGTVNFAGAIRRAVALAGFQDLKNFQRVEMVVIQDQRRCCA
Sequences:
>Translated_373_residues MEVGFSRNARRAFSLDEVAVVPSRRTRHSSEVSIEWKMDAFSFDTPIISSPADSVVSPSTIVELSEFGCLGILDLEGVWT RYENPEPVLREISALPEEKACLGLQKIYSEPIKRHLLERRLQELRDAGVIVAGCLSPQTTNALYKSVISAGVDIFVIRGG TVSAEHVSKSDNVLNLKRFIYELDVPVMVGGVATYTAALHMMRTGAAGVLVGFGGCAGSTNHASLGIKVPMATAIADVAA ARKDYLDESGGRYVQVIADGSMNTSGMAVNALALGADAVMMGTPLVRSTTSPGFGYHWGREAHHMTLPRGRRAYIGQTAS LQEIIQGPGHSPDGTVNFAGAIRRAVALAGFQDLKNFQRVEMVVIQDQRRCCA >Mature_373_residues MEVGFSRNARRAFSLDEVAVVPSRRTRHSSEVSIEWKMDAFSFDTPIISSPADSVVSPSTIVELSEFGCLGILDLEGVWT RYENPEPVLREISALPEEKACLGLQKIYSEPIKRHLLERRLQELRDAGVIVAGCLSPQTTNALYKSVISAGVDIFVIRGG TVSAEHVSKSDNVLNLKRFIYELDVPVMVGGVATYTAALHMMRTGAAGVLVGFGGCAGSTNHASLGIKVPMATAIADVAA ARKDYLDESGGRYVQVIADGSMNTSGMAVNALALGADAVMMGTPLVRSTTSPGFGYHWGREAHHMTLPRGRRAYIGQTAS LQEIIQGPGHSPDGTVNFAGAIRRAVALAGFQDLKNFQRVEMVVIQDQRRCCA
Specific function: Unknown
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPDH/GMPR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001093 - InterPro: IPR005992 [H]
Pfam domain/function: PF00478 IMPDH [H]
EC number: 1.1.1.205
Molecular weight: Translated: 40110; Mature: 40110
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVGFSRNARRAFSLDEVAVVPSRRTRHSSEVSIEWKMDAFSFDTPIISSPADSVVSPST CCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCEECCCCCCCCCCCCCCCCHH IVELSEFGCLGILDLEGVWTRYENPEPVLREISALPEEKACLGLQKIYSEPIKRHLLERR HHHHHHCCEEEEEECCCHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LQELRDAGVIVAGCLSPQTTNALYKSVISAGVDIFVIRGGTVSAEHVSKSDNVLNLKRFI HHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCEECHHHHCCCCCHHHHHHHH YELDVPVMVGGVATYTAALHMMRTGAAGVLVGFGGCAGSTNHASLGIKVPMATAIADVAA HHCCCCEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHH ARKDYLDESGGRYVQVIADGSMNTSGMAVNALALGADAVMMGTPLVRSTTSPGFGYHWGR HHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEHCCCCCCEECCCCCCCCCCCCCCCCCCC EAHHMTLPRGRRAYIGQTASLQEIIQGPGHSPDGTVNFAGAIRRAVALAGFQDLKNFQRV CCCEEECCCCCHHHCCCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHE EMVVIQDQRRCCA EEEEEECCHHCCC >Mature Secondary Structure MEVGFSRNARRAFSLDEVAVVPSRRTRHSSEVSIEWKMDAFSFDTPIISSPADSVVSPST CCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCEECCCCCCCCCCCCCCCCHH IVELSEFGCLGILDLEGVWTRYENPEPVLREISALPEEKACLGLQKIYSEPIKRHLLERR HHHHHHCCEEEEEECCCHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LQELRDAGVIVAGCLSPQTTNALYKSVISAGVDIFVIRGGTVSAEHVSKSDNVLNLKRFI HHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCEECHHHHCCCCCHHHHHHHH YELDVPVMVGGVATYTAALHMMRTGAAGVLVGFGGCAGSTNHASLGIKVPMATAIADVAA HHCCCCEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHH ARKDYLDESGGRYVQVIADGSMNTSGMAVNALALGADAVMMGTPLVRSTTSPGFGYHWGR HHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEHCCCCCCEECCCCCCCCCCCCCCCCCCC EAHHMTLPRGRRAYIGQTASLQEIIQGPGHSPDGTVNFAGAIRRAVALAGFQDLKNFQRV CCCEEECCCCCHHHCCCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHE EMVVIQDQRRCCA EEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: inosine 5'-phosphate; NAD+; H2O
Specific reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA