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The map label for this gene is lemA [H]

Identifier: 28572187

GI number: 28572187

Start: 12143

End: 12715

Strand: Direct

Name: lemA [H]

Synonym: TW012

Alternate gene names: 28572187

Gene position: 12143-12715 (Clockwise)

Preceding gene: 28572186

Following gene: 28572188

Centisome position: 1.31

GC content: 49.56

Gene sequence:

>573_bases
ATGGACGGGGTTTTTCTATGGGTCACCCTGGGCCTTGCATTGGCCATTGTTGTTATTGCGATTTTTGCCTGGGTTGCCTA
TAATCGCCTGGTTGCGTACAATGTGCGTGTCGACGAGGCGTGGAGTGATATCACGGTTCAGCTCAAGCGGCGTGCCGATC
TAATTCCTTCTCTTATTGAGACTGTAAAGGGCTATGCATCCCATGAGAAATCGGTTTTTAAACAGGTTACCCTTGCTCGG
GCAGCAAGTATTGGTGCTAGCGGGGTTGCCGAAGCGGCAGCGGCCGACAATCAACTTCAGGCTGCCTTGAAGAGTATTTT
TGCCGTTGCCGAGGCGTATCCACAACTGCAGGCAAGTCAAAACTTTCTCGACCTTCAGGCGCAGCTGACTGATACCGAGA
ACAAAATACAGGCGTCACGCAGGTTCTATAATGGCGGAGTGCGTGATTTGAATACCCTTATTGGGGTTTTTCCGTCTAAT
ATCGTGGCTAGGATTGCTAAGTTTAGTACTCGTGAGTTTTTTGATGTTGAGCGATCAGAGGCCCTTCAGTCTCCCCCGAA
GATTGTTTTCTAG

Upstream 100 bases:

>100_bases
TCGTGCATGCTGGGGTTTGTTGCCCGCTTCGTGCCTCTCAGGGTATTTCAAGGCTTGTTTGATTCAATGACTAAGGTGTT
TGTATTTGCGGAGGTTTTAA

Downstream 100 bases:

>100_bases
GCAAATGAACAGAGCCGAATGTTTTGATGTGAGTATTTGATGTACAGCTTTATTGCGAGAAACAAAATCAATACCTTTTT
GATATTGTTTGTTTTCATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MDGVFLWVTLGLALAIVVIAIFAWVAYNRLVAYNVRVDEAWSDITVQLKRRADLIPSLIETVKGYASHEKSVFKQVTLAR
AASIGASGVAEAAAADNQLQAALKSIFAVAEAYPQLQASQNFLDLQAQLTDTENKIQASRRFYNGGVRDLNTLIGVFPSN
IVARIAKFSTREFFDVERSEALQSPPKIVF

Sequences:

>Translated_190_residues
MDGVFLWVTLGLALAIVVIAIFAWVAYNRLVAYNVRVDEAWSDITVQLKRRADLIPSLIETVKGYASHEKSVFKQVTLAR
AASIGASGVAEAAAADNQLQAALKSIFAVAEAYPQLQASQNFLDLQAQLTDTENKIQASRRFYNGGVRDLNTLIGVFPSN
IVARIAKFSTREFFDVERSEALQSPPKIVF
>Mature_190_residues
MDGVFLWVTLGLALAIVVIAIFAWVAYNRLVAYNVRVDEAWSDITVQLKRRADLIPSLIETVKGYASHEKSVFKQVTLAR
AASIGASGVAEAAAADNQLQAALKSIFAVAEAYPQLQASQNFLDLQAQLTDTENKIQASRRFYNGGVRDLNTLIGVFPSN
IVARIAKFSTREFFDVERSEALQSPPKIVF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 20879; Mature: 20879

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGVFLWVTLGLALAIVVIAIFAWVAYNRLVAYNVRVDEAWSDITVQLKRRADLIPSLIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHH
TVKGYASHEKSVFKQVTLARAASIGASGVAEAAAADNQLQAALKSIFAVAEAYPQLQASQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NFLDLQAQLTDTENKIQASRRFYNGGVRDLNTLIGVFPSNIVARIAKFSTREFFDVERSE
CHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHH
ALQSPPKIVF
HHCCCCCCCC
>Mature Secondary Structure
MDGVFLWVTLGLALAIVVIAIFAWVAYNRLVAYNVRVDEAWSDITVQLKRRADLIPSLIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHH
TVKGYASHEKSVFKQVTLARAASIGASGVAEAAAADNQLQAALKSIFAVAEAYPQLQASQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NFLDLQAQLTDTENKIQASRRFYNGGVRDLNTLIGVFPSNIVARIAKFSTREFFDVERSE
CHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHH
ALQSPPKIVF
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]