| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is trpG [H]
Identifier: 28572186
GI number: 28572186
Start: 11399
End: 12037
Strand: Direct
Name: trpG [H]
Synonym: TW011
Alternate gene names: 28572186
Gene position: 11399-12037 (Clockwise)
Preceding gene: 28572184
Following gene: 28572187
Centisome position: 1.23
GC content: 50.7
Gene sequence:
>639_bases ATGTTCAAAGTCTTGGTTATTGACAACCACGACAGCTTTATCTACACGCTTGTAAATTATCTGCAGCAACTTGGGGTAAC AACCAGTGTTGTGCGGAGTGATAACAATTGTCATTCGGTTGAGTCTATGCTGGGTGTGCATGACGCAGCTCTCATCTCAC CCGGCCCCGGCACCCCCGAGGAAAGCGGCATCACCCTTTCTGTCATTCGAGCTGCTTACTCTACCTCTACCCCACTTCTT GGGGTTTGCTTGGGCCATCAGGCCCTTGCCGTCGCGTTTGGCGGTGACATAGGGCCTTCCGGAAGGATTATGCACGGAAA GTTGGTTACGGTGCGCCCTCGGCCCAGCGCCATATTCAAGGACCTCCCCACTGCTTTTACCGCAACAAGGTACAACTCAC TTACTGTTACAAAGGTGCCGCAAGCATTGAGGGTAATAGCCAGAGCAGACTGTGGCGAAGTTATGGCACTTGAACACCGG ACGGCACCAATGTATGGTGTGCAATTTCACCCAGAGTCTGCAGTTTCCGAATGGGGTTTTCGCATTTTGGGAAATTGGTT ATACATATCAGGTTTCAACAAGGCCCTGGGAATATCCCGTGATCTGCCCATTGTTGTTTACAATACTCGTGTACGCTAA
Upstream 100 bases:
>100_bases CACACGGGGTTATTTTCGCTGGACTCGTGTTTTTTTCTGCTCATGAACTCCTAAGGGCAGAGACTGCGCGCCTTGAGATA CCCCTATTATATATACCGTT
Downstream 100 bases:
>100_bases GAGGCTCGTGCATGCTGGGGTTTGTTGCCCGCTTCGTGCCTCTCAGGGTATTTCAAGGCTTGTTTGATTCAATGACTAAG GTGTTTGTATTTGCGGAGGT
Product: glutamine amidotransferase
Products: NA
Alternate protein names: Anthranilate synthase component II; Glutamine amido-transferase [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MFKVLVIDNHDSFIYTLVNYLQQLGVTTSVVRSDNNCHSVESMLGVHDAALISPGPGTPEESGITLSVIRAAYSTSTPLL GVCLGHQALAVAFGGDIGPSGRIMHGKLVTVRPRPSAIFKDLPTAFTATRYNSLTVTKVPQALRVIARADCGEVMALEHR TAPMYGVQFHPESAVSEWGFRILGNWLYISGFNKALGISRDLPIVVYNTRVR
Sequences:
>Translated_212_residues MFKVLVIDNHDSFIYTLVNYLQQLGVTTSVVRSDNNCHSVESMLGVHDAALISPGPGTPEESGITLSVIRAAYSTSTPLL GVCLGHQALAVAFGGDIGPSGRIMHGKLVTVRPRPSAIFKDLPTAFTATRYNSLTVTKVPQALRVIARADCGEVMALEHR TAPMYGVQFHPESAVSEWGFRILGNWLYISGFNKALGISRDLPIVVYNTRVR >Mature_212_residues MFKVLVIDNHDSFIYTLVNYLQQLGVTTSVVRSDNNCHSVESMLGVHDAALISPGPGTPEESGITLSVIRAAYSTSTPLL GVCLGHQALAVAFGGDIGPSGRIMHGKLVTVRPRPSAIFKDLPTAFTATRYNSLTVTKVPQALRVIARADCGEVMALEHR TAPMYGVQFHPESAVSEWGFRILGNWLYISGFNKALGISRDLPIVVYNTRVR
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789760, Length=188, Percent_Identity=41.4893617021277, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1787517, Length=189, Percent_Identity=33.8624338624339, Blast_Score=112, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6322638, Length=192, Percent_Identity=38.5416666666667, Blast_Score=134, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6324361, Length=214, Percent_Identity=30.3738317757009, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 22998; Mature: 22998
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS00442 GATASE_TYPE_I ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKVLVIDNHDSFIYTLVNYLQQLGVTTSVVRSDNNCHSVESMLGVHDAALISPGPGTPE CEEEEEEECCCCHHHHHHHHHHHCCCEEEEHCCCCCHHHHHHHHCCCCCEEECCCCCCCC ESGITLSVIRAAYSTSTPLLGVCLGHQALAVAFGGDIGPSGRIMHGKLVTVRPRPSAIFK CCCCCCEEEHHHHCCCCCCEEEECCCCEEEEEECCCCCCCCEEEECEEEEECCCCHHHHH DLPTAFTATRYNSLTVTKVPQALRVIARADCGEVMALEHRTAPMYGVQFHPESAVSEWGF HCCCHHEECCCCCEEEEHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCHHHHHHCCC RILGNWLYISGFNKALGISRDLPIVVYNTRVR EEECCEEEEECCCHHCCCCCCCCEEEEECCCC >Mature Secondary Structure MFKVLVIDNHDSFIYTLVNYLQQLGVTTSVVRSDNNCHSVESMLGVHDAALISPGPGTPE CEEEEEEECCCCHHHHHHHHHHHCCCEEEEHCCCCCHHHHHHHHCCCCCEEECCCCCCCC ESGITLSVIRAAYSTSTPLLGVCLGHQALAVAFGGDIGPSGRIMHGKLVTVRPRPSAIFK CCCCCCEEEHHHHCCCCCCEEEECCCCEEEEEECCCCCCCCEEEECEEEEECCCCHHHHH DLPTAFTATRYNSLTVTKVPQALRVIARADCGEVMALEHRTAPMYGVQFHPESAVSEWGF HCCCHHEECCCCCEEEEHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCHHHHHHCCC RILGNWLYISGFNKALGISRDLPIVVYNTRVR EEECCEEEEECCCHHCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]