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The map label for this gene is 28379669

Identifier: 28379669

GI number: 28379669

Start: 2946969

End: 2947484

Strand: Direct

Name: 28379669

Synonym: lp_3310

Alternate gene names: NA

Gene position: 2946969-2947484 (Clockwise)

Preceding gene: 28379668

Following gene: 28379671

Centisome position: 89.08

GC content: 42.83

Gene sequence:

>516_bases
ATGCTAGCTTGGCTACCATTCTTTTTGATTTCATTAATGTTTATTGTTCTACTATACGCTTGTGCGCGATCAGCGCGCAC
AAATATCCAGCGTTTTAAGCAACTCAGTTTAATTGCCTTTCTCTGGGTCTTAACTGCTTTTTGCTATACACCTACCAGTT
ACAATTTTGGTACCCAACTCGTTATTCAATATATTCAATGGGGACCCGTTAAGCTGAACGTGATTCCTTTCCAACAACTT
GACATTGAATTTTGGCTCAACGTTCTCCTCACTGTTCCATTGGGCGGTTTACTGGCATGGAATTTTCCCGACTTGCCTTG
GCGTCGTTTTATTTGGTTGGGATTTCTTACGGGGCTAACACTCGAGCTGGGACAATTCATCCTTGACTGGTTGGTTAACC
TCAAACGTTGGGTTGATATCGATGATGTCATCACAAATTGGGCTGGTGTCATTATCGGTGCCGCTGGTTATAAAATTGCA
CGTCATGTTCCCGGACTTCGCTGGTTGCAAAAATAA

Upstream 100 bases:

>100_bases
TTGAAGTAAAAAGTGTCAACACTTTTTCTGAATTTCTTTTTATTAATAGTCAAACCAGCTTTCTTTCTCTATACTATTTA
ATTAAAGGAGCGACTAAATT

Downstream 100 bases:

>100_bases
CGTATATATAGAAGCAAAAAGCAAAATAGCGTTTGCTTAGCACCCACAAGTGCCAAACACTTCAGCGGTCTAGCTGTCAT
GAAATCGTAATTAAATAAGC

Product: integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; Glycopeptide Antibiotics Resistance Protein

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MLAWLPFFLISLMFIVLLYACARSARTNIQRFKQLSLIAFLWVLTAFCYTPTSYNFGTQLVIQYIQWGPVKLNVIPFQQL
DIEFWLNVLLTVPLGGLLAWNFPDLPWRRFIWLGFLTGLTLELGQFILDWLVNLKRWVDIDDVITNWAGVIIGAAGYKIA
RHVPGLRWLQK

Sequences:

>Translated_171_residues
MLAWLPFFLISLMFIVLLYACARSARTNIQRFKQLSLIAFLWVLTAFCYTPTSYNFGTQLVIQYIQWGPVKLNVIPFQQL
DIEFWLNVLLTVPLGGLLAWNFPDLPWRRFIWLGFLTGLTLELGQFILDWLVNLKRWVDIDDVITNWAGVIIGAAGYKIA
RHVPGLRWLQK
>Mature_171_residues
MLAWLPFFLISLMFIVLLYACARSARTNIQRFKQLSLIAFLWVLTAFCYTPTSYNFGTQLVIQYIQWGPVKLNVIPFQQL
DIEFWLNVLLTVPLGGLLAWNFPDLPWRRFIWLGFLTGLTLELGQFILDWLVNLKRWVDIDDVITNWAGVIIGAAGYKIA
RHVPGLRWLQK

Specific function: Unknown

COG id: COG4767

COG function: function code V; Glycopeptide antibiotics resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19919; Mature: 19919

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAWLPFFLISLMFIVLLYACARSARTNIQRFKQLSLIAFLWVLTAFCYTPTSYNFGTQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VIQYIQWGPVKLNVIPFQQLDIEFWLNVLLTVPLGGLLAWNFPDLPWRRFIWLGFLTGLT
HHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHEECCCCCCCHHHHHHHHHHHHHH
LELGQFILDWLVNLKRWVDIDDVITNWAGVIIGAAGYKIARHVPGLRWLQK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MLAWLPFFLISLMFIVLLYACARSARTNIQRFKQLSLIAFLWVLTAFCYTPTSYNFGTQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VIQYIQWGPVKLNVIPFQQLDIEFWLNVLLTVPLGGLLAWNFPDLPWRRFIWLGFLTGLT
HHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHEECCCCCCCHHHHHHHHHHHHHH
LELGQFILDWLVNLKRWVDIDDVITNWAGVIIGAAGYKIARHVPGLRWLQK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA