| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is fur [H]
Identifier: 28379623
GI number: 28379623
Start: 2893560
End: 2894042
Strand: Direct
Name: fur [H]
Synonym: lp_3247
Alternate gene names: 28379623
Gene position: 2893560-2894042 (Clockwise)
Preceding gene: 28379621
Following gene: 28379627
Centisome position: 87.46
GC content: 42.44
Gene sequence:
>483_bases GTGGCAGAAGATATGTTGACCCAAGCCTTGCAGCAATTAAAGGACCATAAAATCCGTGTAACGCCGCAACGGCAAATCAT TCTTAATTATTTGATTACTCACCATAATCATCCATCCGTCGAAACCATCTATCAGGAATTAGCAACTCAATTACCTAACC TGAGCTTGGCAACGGTTTACAATACGTTAAAACTTTTTGTCGACTTAGGAATCGTAATTGAATTACAAAATGGCGATGCT GGCACCCACTATGACTTTTTCGGTCGACCACATTATCACGTCGTTTGTGAGAATTGTGGTAAAATTACTGACGTTTTCGA ACCCGACCTCCGCAGTGTCGAAGCCAAGGCGGCGGAACTCTCTGGGTACTTGGTTACGGGTCACAATATGGAAGTCTATG GATTATGCCCAGACTGCCAGAAACTACTCAATGTAACTAAAACAGCTGATTTAAAGCGATTGAAATTGACGCACAGTGAA TAG
Upstream 100 bases:
>100_bases AATTTTGTCAAAAGTTTTATCTAGTAATGTTTCTAAATTGGAATCCTTCTAAAAAGTGTGGTTTAATAAGGGTGAATATG ATAAAAGGAGGAACCGCGTC
Downstream 100 bases:
>100_bases AACCAGTTCAATGGCAACCGGCTATTTAGCGCGCTGGTTATCCTAAAACAAAAGGAACACTTTCAGTTTTCCTGTATTAG TCCCTGTCAACCTTAAGTGG
Product: ferric uptake regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MAEDMLTQALQQLKDHKIRVTPQRQIILNYLITHHNHPSVETIYQELATQLPNLSLATVYNTLKLFVDLGIVIELQNGDA GTHYDFFGRPHYHVVCENCGKITDVFEPDLRSVEAKAAELSGYLVTGHNMEVYGLCPDCQKLLNVTKTADLKRLKLTHSE
Sequences:
>Translated_160_residues MAEDMLTQALQQLKDHKIRVTPQRQIILNYLITHHNHPSVETIYQELATQLPNLSLATVYNTLKLFVDLGIVIELQNGDA GTHYDFFGRPHYHVVCENCGKITDVFEPDLRSVEAKAAELSGYLVTGHNMEVYGLCPDCQKLLNVTKTADLKRLKLTHSE >Mature_159_residues AEDMLTQALQQLKDHKIRVTPQRQIILNYLITHHNHPSVETIYQELATQLPNLSLATVYNTLKLFVDLGIVIELQNGDAG THYDFFGRPHYHVVCENCGKITDVFEPDLRSVEAKAAELSGYLVTGHNMEVYGLCPDCQKLLNVTKTADLKRLKLTHSE
Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18130; Mature: 17999
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDMLTQALQQLKDHKIRVTPQRQIILNYLITHHNHPSVETIYQELATQLPNLSLATVY CCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH NTLKLFVDLGIVIELQNGDAGTHYDFFGRPHYHVVCENCGKITDVFEPDLRSVEAKAAEL HHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH SGYLVTGHNMEVYGLCPDCQKLLNVTKTADLKRLKLTHSE CCEEEECCCEEEEEECHHHHHHHHHHHCCCHHEEEECCCC >Mature Secondary Structure AEDMLTQALQQLKDHKIRVTPQRQIILNYLITHHNHPSVETIYQELATQLPNLSLATVY CHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH NTLKLFVDLGIVIELQNGDAGTHYDFFGRPHYHVVCENCGKITDVFEPDLRSVEAKAAEL HHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH SGYLVTGHNMEVYGLCPDCQKLLNVTKTADLKRLKLTHSE CCEEEECCCEEEEEECHHHHHHHHHHHCCCHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA