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The map label for this gene is fliY [C]

Identifier: 28379591

GI number: 28379591

Start: 2860144

End: 2860947

Strand: Direct

Name: fliY [C]

Synonym: lp_3209

Alternate gene names: 28379591

Gene position: 2860144-2860947 (Clockwise)

Preceding gene: 28379590

Following gene: 28379592

Centisome position: 86.45

GC content: 42.66

Gene sequence:

>804_bases
ATGAAGTCATGGGTTAAAAAATTAAGCGTTGCAGTGCTTGGGTTAGGTTTAGCAGTTACATTGACCGCCTGTGGTAGTAA
CACTAGCAGCAGTTCAAAGTCTAACGACCTCGGATTGCAAAAATCGGGGACGTTGACGATTGGCTTAGAAGGCACTTTTC
AACCATATAGCTACCGTAAAGACGGTAAATTAACTGGTTTTGAAGTTGACCTCGGGAAAGCCGTTGCCAAGAAGATGGGA
CTAAAAGCTAAATTTGTACCAACGAAGTTCGATTCGTTAGTAGCTGGTTTAGACACAAACAAATTCGACGTTGTCATGAA
TAACATGTCCGAAACGGCGGCCCGAAAGAAGAAGTATCTCTTCTCGACCCCTTACATTTATTCTAAATCACAATTAGCCG
TCAAGAAGAACTCATCGATTAGTAAGATTACCGATATTAAGGGTAAGAAAGTTGCCGAAACAACGACTAGCAATAACGCA
ACGGATGCTAAACGTTTAGGTGCAACCATCACCCCAACCGATAGTTTCCAACAGTCGATCGACCTCGTCTCACAAGGCCG
CGTCGCTGGGACTATTAATTCTCGTGAATCCTTCTATGCTTACTTCAAGCAGAATCCGAAGGCTAACATTAAGCTGATTG
ATTCCGGCGATCACATTGCCTCACAGAAAATCGGGGCCATCGTCACTAAGCAACACCCTAAGATGCAAAAACAAATCTCG
AAAGCAATCCAAGAATTACGTAAGGACGGCACGTTAAAGAAATTGTCCAATAAGTATTTTGGTGGTAACGTTACTGATAA
GTAA

Upstream 100 bases:

>100_bases
AGCATTGGTCCGTTTGCGACACTCAATGCTTATTTTTTGTTAACAGCTTCATTTTCGGATAAACTAGGAGTGTTGTGAAA
AATTTCTAGGAGTGTGAATC

Downstream 100 bases:

>100_bases
CGTACCATTGCCCGCTATTATGGCGGGATACATAGCACCAAATTCTAATTTGTTACAGGAGGCTCCCTATGGATTCAATC
TGGCACATCATTGTCACATC

Product: amino acid ABC transporter, substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKSWVKKLSVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYRKDGKLTGFEVDLGKAVAKKMG
LKAKFVPTKFDSLVAGLDTNKFDVVMNNMSETAARKKKYLFSTPYIYSKSQLAVKKNSSISKITDIKGKKVAETTTSNNA
TDAKRLGATITPTDSFQQSIDLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGAIVTKQHPKMQKQIS
KAIQELRKDGTLKKLSNKYFGGNVTDK

Sequences:

>Translated_267_residues
MKSWVKKLSVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYRKDGKLTGFEVDLGKAVAKKMG
LKAKFVPTKFDSLVAGLDTNKFDVVMNNMSETAARKKKYLFSTPYIYSKSQLAVKKNSSISKITDIKGKKVAETTTSNNA
TDAKRLGATITPTDSFQQSIDLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGAIVTKQHPKMQKQIS
KAIQELRKDGTLKKLSNKYFGGNVTDK
>Mature_267_residues
MKSWVKKLSVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYRKDGKLTGFEVDLGKAVAKKMG
LKAKFVPTKFDSLVAGLDTNKFDVVMNNMSETAARKKKYLFSTPYIYSKSQLAVKKNSSISKITDIKGKKVAETTTSNNA
TDAKRLGATITPTDSFQQSIDLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGAIVTKQHPKMQKQIS
KAIQELRKDGTLKKLSNKYFGGNVTDK

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=260, Percent_Identity=36.1538461538462, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1787088, Length=264, Percent_Identity=27.6515151515151, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787085, Length=230, Percent_Identity=25.6521739130435, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788649, Length=267, Percent_Identity=26.5917602996255, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788648, Length=239, Percent_Identity=27.6150627615063, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1787031, Length=267, Percent_Identity=26.2172284644195, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28969; Mature: 28969

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSWVKKLSVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYRK
CHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
DGKLTGFEVDLGKAVAKKMGLKAKFVPTKFDSLVAGLDTNKFDVVMNNMSETAARKKKYL
CCCEEEEEEHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCCHHEEECCHHHHHHHHHHHE
FSTPYIYSKSQLAVKKNSSISKITDIKGKKVAETTTSNNATDAKRLGATITPTDSFQQSI
ECCCCEECCCEEEEECCCCHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCCHHHHHHH
DLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGAIVTKQHPKMQKQIS
HHHHCCCEEEEECCCHHEEEEECCCCCCCEEEEECCCCHHHHHHHHEEECCCHHHHHHHH
KAIQELRKDGTLKKLSNKYFGGNVTDK
HHHHHHHHCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKSWVKKLSVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYRK
CHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
DGKLTGFEVDLGKAVAKKMGLKAKFVPTKFDSLVAGLDTNKFDVVMNNMSETAARKKKYL
CCCEEEEEEHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCCHHEEECCHHHHHHHHHHHE
FSTPYIYSKSQLAVKKNSSISKITDIKGKKVAETTTSNNATDAKRLGATITPTDSFQQSI
ECCCCEECCCEEEEECCCCHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCCHHHHHHH
DLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGAIVTKQHPKMQKQIS
HHHHCCCEEEEECCCHHEEEEECCCCCCCEEEEECCCCHHHHHHHHEEECCCHHHHHHHH
KAIQELRKDGTLKKLSNKYFGGNVTDK
HHHHHHHHCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]