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The map label for this gene is 28379515

Identifier: 28379515

GI number: 28379515

Start: 2763169

End: 2763768

Strand: Direct

Name: 28379515

Synonym: lp_3102

Alternate gene names: NA

Gene position: 2763169-2763768 (Clockwise)

Preceding gene: 28379511

Following gene: 28379517

Centisome position: 83.52

GC content: 47.5

Gene sequence:

>600_bases
ATGACTAAAACACGTCGTCGTGGCGCTGAACTCGAAAACGCCATCTATCAAGCCGCCCGTGACATCTTAAATCAAGATGG
TCTTGAACAATTGACGTTCGCTAACGTCGCGGAACAGGCCGGCACCAGTAAGCCTGTCATTTACCGACGCTGGCGTTCAC
CACTAGAGCTTGCAATTGCGGCTATCCAGGACCAAATCATTACGGAAAACCATGGTCAACTAGACGAAGTGAGCTTGACC
GGTCAGACACTTTCTGAAGATTTATTCCAAGTACTCAAGCGCTTCACTGTCAGTATTAATACATTCAATCAAGCTTTAGT
TATCACTTGGTTTCACCACCTAGATCAACAAGCAAATCCAGAAGTTAAGGACTTGCTCAATGCTGTGAAAAAGATTGACG
CCCATGCGATTGAACGCGTGTGTCAGCGTGCACAGCAACGTGGGGAACTGCGTACGGGGACTTTATCGTGCGACTTACAA
CTGATGCCATTCGACTGGCTTCGCTACCGTGCTTTTGCTAATGAACCGATTACTGATGCCACCCTTCATCTACTTGTCGA
TGATTTATTAGTCCCCGCCTATCAACACGCGTTGGGATGA

Upstream 100 bases:

>100_bases
GAAACTTAAAGTGTCTTATTCGCATAACTGGTATAATACGCTATATAAAGAAAAAGTCAATAAGAAACTTAAAGTATCTT
ATTTGAAAAAGAGGGATTAC

Downstream 100 bases:

>100_bases
TGATTACCGCTGTCTATAGACAATAAAACGCGTAAATTACTTATTTTACTGTGAGTAATTTACGCGTTTTAAATTTTTAT
CTCAATCCTATTATTTTTCG

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcription Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTKTRRRGAELENAIYQAARDILNQDGLEQLTFANVAEQAGTSKPVIYRRWRSPLELAIAAIQDQIITENHGQLDEVSLT
GQTLSEDLFQVLKRFTVSINTFNQALVITWFHHLDQQANPEVKDLLNAVKKIDAHAIERVCQRAQQRGELRTGTLSCDLQ
LMPFDWLRYRAFANEPITDATLHLLVDDLLVPAYQHALG

Sequences:

>Translated_199_residues
MTKTRRRGAELENAIYQAARDILNQDGLEQLTFANVAEQAGTSKPVIYRRWRSPLELAIAAIQDQIITENHGQLDEVSLT
GQTLSEDLFQVLKRFTVSINTFNQALVITWFHHLDQQANPEVKDLLNAVKKIDAHAIERVCQRAQQRGELRTGTLSCDLQ
LMPFDWLRYRAFANEPITDATLHLLVDDLLVPAYQHALG
>Mature_198_residues
TKTRRRGAELENAIYQAARDILNQDGLEQLTFANVAEQAGTSKPVIYRRWRSPLELAIAAIQDQIITENHGQLDEVSLTG
QTLSEDLFQVLKRFTVSINTFNQALVITWFHHLDQQANPEVKDLLNAVKKIDAHAIERVCQRAQQRGELRTGTLSCDLQL
MPFDWLRYRAFANEPITDATLHLLVDDLLVPAYQHALG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22618; Mature: 22487

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTRRRGAELENAIYQAARDILNQDGLEQLTFANVAEQAGTSKPVIYRRWRSPLELAIA
CCCCHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH
AIQDQIITENHGQLDEVSLTGQTLSEDLFQVLKRFTVSINTFNQALVITWFHHLDQQANP
HHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EVKDLLNAVKKIDAHAIERVCQRAQQRGELRTGTLSCDLQLMPFDWLRYRAFANEPITDA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCHHH
TLHLLVDDLLVPAYQHALG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKTRRRGAELENAIYQAARDILNQDGLEQLTFANVAEQAGTSKPVIYRRWRSPLELAIA
CCCHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH
AIQDQIITENHGQLDEVSLTGQTLSEDLFQVLKRFTVSINTFNQALVITWFHHLDQQANP
HHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EVKDLLNAVKKIDAHAIERVCQRAQQRGELRTGTLSCDLQLMPFDWLRYRAFANEPITDA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCHHH
TLHLLVDDLLVPAYQHALG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA