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The map label for this gene is 28379166

Identifier: 28379166

GI number: 28379166

Start: 2360431

End: 2360751

Strand: Direct

Name: 28379166

Synonym: lp_2654

Alternate gene names: NA

Gene position: 2360431-2360751 (Clockwise)

Preceding gene: 28379165

Following gene: 28379171

Centisome position: 71.35

GC content: 44.86

Gene sequence:

>321_bases
ATGTTAACCGAGATAGGCAAAATCATTCGGCAACGCCGACAGCAACACGGCATCACCATCGAGCAATTGGCCGAACAATC
GAATGTTTCAATCTCGCTAATTTCTCGACTCGAACGTGGTAAGGTCGATAACATTAAACTACAAAGTTTGACCGCAATCG
CTGAAACTCTGAATTTAAAAATAGCGGACTTCTTTCGCGACGAGCTTCTCCAATCACCTAATGTTGTTGCATTACTCGAC
TACCTGAGTGATCTGCCAGCCCATCAACGTGAAGAACTTGCCGGTACGTTACTCAAACTACTCCGACTATCCAAATCGTG
A

Upstream 100 bases:

>100_bases
CGCATTTAATCGAGAACTACTGATTGCTTGAATCTGTTTCAAGCATAGCGAAACCTCTAAAATTAGTGCTAAGACGCTTA
ATGGATTAAGGAGGATTCCC

Downstream 100 bases:

>100_bases
GCATTTGCGCAACGCACTCCGGACAGTTAGTTCACCATTGAACCCCGTGATTCATCTACACTAAAAAATGATTCACCTTC
CTCTGACAAGAAGGCGAATC

Product: transcription regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MLTEIGKIIRQRRQQHGITIEQLAEQSNVSISLISRLERGKVDNIKLQSLTAIAETLNLKIADFFRDELLQSPNVVALLD
YLSDLPAHQREELAGTLLKLLRLSKS

Sequences:

>Translated_106_residues
MLTEIGKIIRQRRQQHGITIEQLAEQSNVSISLISRLERGKVDNIKLQSLTAIAETLNLKIADFFRDELLQSPNVVALLD
YLSDLPAHQREELAGTLLKLLRLSKS
>Mature_106_residues
MLTEIGKIIRQRRQQHGITIEQLAEQSNVSISLISRLERGKVDNIKLQSLTAIAETLNLKIADFFRDELLQSPNVVALLD
YLSDLPAHQREELAGTLLKLLRLSKS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11990; Mature: 11990

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50943 HTH_CROC1 ; PS00716 SIGMA70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTEIGKIIRQRRQQHGITIEQLAEQSNVSISLISRLERGKVDNIKLQSLTAIAETLNLK
CCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IADFFRDELLQSPNVVALLDYLSDLPAHQREELAGTLLKLLRLSKS
HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTEIGKIIRQRRQQHGITIEQLAEQSNVSISLISRLERGKVDNIKLQSLTAIAETLNLK
CCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IADFFRDELLQSPNVVALLDYLSDLPAHQREELAGTLLKLLRLSKS
HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA