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The map label for this gene is pepF2 [H]

Identifier: 28379142

GI number: 28379142

Start: 2336934

End: 2338733

Strand: Direct

Name: pepF2 [H]

Synonym: lp_2621

Alternate gene names: 28379142

Gene position: 2336934-2338733 (Clockwise)

Preceding gene: 28379139

Following gene: 28379143

Centisome position: 70.64

GC content: 48.83

Gene sequence:

>1800_bases
ATGCACTATTCCGAAACGTGGGATTTGGACAGTATCTTTGCTGGTGGCATTGATTCCCCAGCACTAACTGCAAAAATGTC
CACGATTAAACAGCAGTTGACCACGACAGCAGACACCTTAGTTCACTGGCGTGCTGCCGCTGACACACCAGACGCCGACT
GGTTTACCCAACTCGTCAACAGTCTGCAAGCCATTCAAGCCGGTATTGACCAAGCTACCGTTTTCGTGGTTGCTTATCAA
TCCGCACATGCGGACGACACCAAAGCCGCCCCACTATTGAACCAAATTTATCAACTTGATAATCAGTTAAACAATTTATT
AACCCGCTTCAAGAAGCAGCTCGTTAAGTTAGATCAAGCCACCTTTGACACGCTCGTGCAACAACCGGCACTACAAGCCA
TCGCCTTTAACTTAACCGAAATGCGTCAGCAAGGCTTAGCGCTCCTAGATGACGACACTGAAGCCCTAATCAATGACTTA
GCACTCGACGGTTTTCAGGGTTGGAGTGACCACTACGACACGTTAGTTAGCCAAATTCAAGTGCCCTATACCGATGAAAA
CGGGATAACCCAACAACTATCCGCGGGTCAAGCTCAAAACATGTTAGCAGCCGCCATGCCGAACGCCCAACGCGCCGAAT
TAATGCGCAACTGGGAGCACGCTTGGCAAACTCACGCCGCTCCCTTTGCTGATACGTTGAACCACTTGGCGGGCTTCCGA
CTTGCCAATTATCGTGCGCATGGTACGACGAACTTCCTACAGAAACCACTAGAACTCAACCGCATGAGTCAAGCGACACT
AGACACAATGTACCAAGTTGTCGCTGACAGCAAGGACATTTTACTAAGTTACCTGAAGCGTAAGGCCCAGTTACTCGGTA
AAGATCAACTAGATTGGCAAGATATTGAAGCCCCACTAACCTTGGGACAACTTCCTAACCAAACTTACGATCAAGCTGCC
GATTTTGTCATTAACAACTTTCGCCAATTTAGTCCAAAGATGGGCGCTTTAGCCCAACACGCCCTTGAACATCGTTGGGT
CGAAGCTGAGAATCGCCCTAATAAGCGGCCTGGTGGCTATATGGAAAATCTACCAGAGACCCACGAATCCCGAATTTTCA
TGACGTTTACGGGTTCACCTAATGACACAGCCACCCTCGCCCACGAATTAGGGCACGCCTTTCATGGCAGCGTCATTCAA
GATCTGCCACTTTGGCGTCAAGATTACGCGATGAACGTGGCCGAAACCGCCTCAACATTCGCCGAACTGATTGTCGCTGA
CGCCAGTGTCAAAGCGGCCGATGATGCCAAAACCAAATTAACTTTATTGGATGCTAAAATGCAAAATCCGTTAGCCATGT
TTCTGGATATTCGAGCTCGCTTCCTGTTTGAGACGCGCTTCTATGCCGCCCGTCAGCACGGGATCGTCACTCCTGATACT
TTGTCAGACTTGATGCTAACCGCCCAAAAAGACGCCTATGGTAATGCCTTAAATACTTACCACCCGATGTTTTGGGCTAG
CAAGTTGCACTTTTACATTGACGACGTCCCGTTTTATAACTTTCCATACACATTTGGCTACCTTTTCAGTCTCGGTATCT
ATGCTCAAGCTAAAACACAATCGGACTTTGAAGACCGCTACATTGCCCTATTGCGAGACACCGCCAACATGTCGACCGAA
GCCCTAGCTGCCAAACACCTCGGTGTTGATCTGACCACACCGGCCTTCTGGCAAGCTGGTGTGGCTTTGATCAAGCGGGA
CATCGATGAATTCATGGCGTTATCCGCACCGTTAATCTAA

Upstream 100 bases:

>100_bases
ATGAGACAAAAATCTGTTTTGAGCGGGAAAATTTCGCCACTACTTCATAATAACCGTTATAATTAAAGATAACTAGACCA
GATTGAGGAGGCTTCTTTTT

Downstream 100 bases:

>100_bases
GGAATGGAAGTGAGCACATGTTTCCAGAACGTTTAAGAGCACTACGTCGGGGGCAAAAAATGACCCTCGCTCAACTCGCG
GCGGCCCTCAATCAAATGCC

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MHYSETWDLDSIFAGGIDSPALTAKMSTIKQQLTTTADTLVHWRAAADTPDADWFTQLVNSLQAIQAGIDQATVFVVAYQ
SAHADDTKAAPLLNQIYQLDNQLNNLLTRFKKQLVKLDQATFDTLVQQPALQAIAFNLTEMRQQGLALLDDDTEALINDL
ALDGFQGWSDHYDTLVSQIQVPYTDENGITQQLSAGQAQNMLAAAMPNAQRAELMRNWEHAWQTHAAPFADTLNHLAGFR
LANYRAHGTTNFLQKPLELNRMSQATLDTMYQVVADSKDILLSYLKRKAQLLGKDQLDWQDIEAPLTLGQLPNQTYDQAA
DFVINNFRQFSPKMGALAQHALEHRWVEAENRPNKRPGGYMENLPETHESRIFMTFTGSPNDTATLAHELGHAFHGSVIQ
DLPLWRQDYAMNVAETASTFAELIVADASVKAADDAKTKLTLLDAKMQNPLAMFLDIRARFLFETRFYAARQHGIVTPDT
LSDLMLTAQKDAYGNALNTYHPMFWASKLHFYIDDVPFYNFPYTFGYLFSLGIYAQAKTQSDFEDRYIALLRDTANMSTE
ALAAKHLGVDLTTPAFWQAGVALIKRDIDEFMALSAPLI

Sequences:

>Translated_599_residues
MHYSETWDLDSIFAGGIDSPALTAKMSTIKQQLTTTADTLVHWRAAADTPDADWFTQLVNSLQAIQAGIDQATVFVVAYQ
SAHADDTKAAPLLNQIYQLDNQLNNLLTRFKKQLVKLDQATFDTLVQQPALQAIAFNLTEMRQQGLALLDDDTEALINDL
ALDGFQGWSDHYDTLVSQIQVPYTDENGITQQLSAGQAQNMLAAAMPNAQRAELMRNWEHAWQTHAAPFADTLNHLAGFR
LANYRAHGTTNFLQKPLELNRMSQATLDTMYQVVADSKDILLSYLKRKAQLLGKDQLDWQDIEAPLTLGQLPNQTYDQAA
DFVINNFRQFSPKMGALAQHALEHRWVEAENRPNKRPGGYMENLPETHESRIFMTFTGSPNDTATLAHELGHAFHGSVIQ
DLPLWRQDYAMNVAETASTFAELIVADASVKAADDAKTKLTLLDAKMQNPLAMFLDIRARFLFETRFYAARQHGIVTPDT
LSDLMLTAQKDAYGNALNTYHPMFWASKLHFYIDDVPFYNFPYTFGYLFSLGIYAQAKTQSDFEDRYIALLRDTANMSTE
ALAAKHLGVDLTTPAFWQAGVALIKRDIDEFMALSAPLI
>Mature_599_residues
MHYSETWDLDSIFAGGIDSPALTAKMSTIKQQLTTTADTLVHWRAAADTPDADWFTQLVNSLQAIQAGIDQATVFVVAYQ
SAHADDTKAAPLLNQIYQLDNQLNNLLTRFKKQLVKLDQATFDTLVQQPALQAIAFNLTEMRQQGLALLDDDTEALINDL
ALDGFQGWSDHYDTLVSQIQVPYTDENGITQQLSAGQAQNMLAAAMPNAQRAELMRNWEHAWQTHAAPFADTLNHLAGFR
LANYRAHGTTNFLQKPLELNRMSQATLDTMYQVVADSKDILLSYLKRKAQLLGKDQLDWQDIEAPLTLGQLPNQTYDQAA
DFVINNFRQFSPKMGALAQHALEHRWVEAENRPNKRPGGYMENLPETHESRIFMTFTGSPNDTATLAHELGHAFHGSVIQ
DLPLWRQDYAMNVAETASTFAELIVADASVKAADDAKTKLTLLDAKMQNPLAMFLDIRARFLFETRFYAARQHGIVTPDT
LSDLMLTAQKDAYGNALNTYHPMFWASKLHFYIDDVPFYNFPYTFGYLFSLGIYAQAKTQSDFEDRYIALLRDTANMSTE
ALAAKHLGVDLTTPAFWQAGVALIKRDIDEFMALSAPLI

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 67219; Mature: 67219

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS01277 RIBONUCLEASE_PH ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYSETWDLDSIFAGGIDSPALTAKMSTIKQQLTTTADTLVHWRAAADTPDADWFTQLVN
CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SLQAIQAGIDQATVFVVAYQSAHADDTKAAPLLNQIYQLDNQLNNLLTRFKKQLVKLDQA
HHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFDTLVQQPALQAIAFNLTEMRQQGLALLDDDTEALINDLALDGFQGWSDHYDTLVSQIQ
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHEE
VPYTDENGITQQLSAGQAQNMLAAAMPNAQRAELMRNWEHAWQTHAAPFADTLNHLAGFR
CCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
LANYRAHGTTNFLQKPLELNRMSQATLDTMYQVVADSKDILLSYLKRKAQLLGKDQLDWQ
HHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHH
DIEAPLTLGQLPNQTYDQAADFVINNFRQFSPKMGALAQHALEHRWVEAENRPNKRPGGY
HCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH
MENLPETHESRIFMTFTGSPNDTATLAHELGHAFHGSVIQDLPLWRQDYAMNVAETASTF
HHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
AELIVADASVKAADDAKTKLTLLDAKMQNPLAMFLDIRARFLFETRFYAARQHGIVTPDT
HHHHHHCCCCCCCCCCHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LSDLMLTAQKDAYGNALNTYHPMFWASKLHFYIDDVPFYNFPYTFGYLFSLGIYAQAKTQ
HHHHHHHHCCHHCCCCHHHCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHEECCCC
SDFEDRYIALLRDTANMSTEALAAKHLGVDLTTPAFWQAGVALIKRDIDEFMALSAPLI
CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHYSETWDLDSIFAGGIDSPALTAKMSTIKQQLTTTADTLVHWRAAADTPDADWFTQLVN
CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SLQAIQAGIDQATVFVVAYQSAHADDTKAAPLLNQIYQLDNQLNNLLTRFKKQLVKLDQA
HHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFDTLVQQPALQAIAFNLTEMRQQGLALLDDDTEALINDLALDGFQGWSDHYDTLVSQIQ
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHEE
VPYTDENGITQQLSAGQAQNMLAAAMPNAQRAELMRNWEHAWQTHAAPFADTLNHLAGFR
CCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
LANYRAHGTTNFLQKPLELNRMSQATLDTMYQVVADSKDILLSYLKRKAQLLGKDQLDWQ
HHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHH
DIEAPLTLGQLPNQTYDQAADFVINNFRQFSPKMGALAQHALEHRWVEAENRPNKRPGGY
HCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH
MENLPETHESRIFMTFTGSPNDTATLAHELGHAFHGSVIQDLPLWRQDYAMNVAETASTF
HHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
AELIVADASVKAADDAKTKLTLLDAKMQNPLAMFLDIRARFLFETRFYAARQHGIVTPDT
HHHHHHCCCCCCCCCCHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LSDLMLTAQKDAYGNALNTYHPMFWASKLHFYIDDVPFYNFPYTFGYLFSLGIYAQAKTQ
HHHHHHHHCCHHCCCCHHHCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHEECCCC
SDFEDRYIALLRDTANMSTEALAAKHLGVDLTTPAFWQAGVALIKRDIDEFMALSAPLI
CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]