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The map label for this gene is ykhA [H]

Identifier: 28378375

GI number: 28378375

Start: 1534765

End: 1535265

Strand: Direct

Name: ykhA [H]

Synonym: lp_1686

Alternate gene names: 28378375

Gene position: 1534765-1535265 (Clockwise)

Preceding gene: 28378374

Following gene: 28378376

Centisome position: 46.39

GC content: 45.51

Gene sequence:

>501_bases
ATGGAACCAATTCATATTTCACAGACTTTATCAATTACCAATCACCGTGTGTTTTCAGCTGATTTGAATGAGCACGACAC
GGTTTTTGGCGGAAAAATCTTGACGACTATCGATGATAATTCATCGATTGCCGCATCGCGAGTGGCTCGAATTGAGACGG
TGACCGTGTCAGTCGATCAGGTCAATTTTTTATTGCCGTTTCGGTTACAAGACTCAATGTGTGCGGAATCTTACGTTTCG
GGCGTTGGTCACCGCTCAATCGAGGTATTTACTAAAATCATTGGTGAACACTTGAAGACCGGCGAACGGTTTTTGGGATT
GACTTGCTTTTCAACGTTCGTGGTGACGGACCGTAATATTGAATTACCACTGTTAGTCGCTGATAAACCAGAATACACGT
TTGTTGCTCAGGGCTATCAAGAGCGGCAGGCCGCCCGGTTAGCCAAACTAAAGCGCCAGCAAGACTTTAATGCGCACATT
AGCGTTGAATTGCCGTGGTGA

Upstream 100 bases:

>100_bases
GTGTCCGAACAACAACCGAGCTAGTTAGTCTGTTTTAATCACATTGTAGGTCGTTTGCAGTGATATAAATAAAAATAATT
AAAGATGACGGGGTGCAGAC

Downstream 100 bases:

>100_bases
ATCGCTTTAAATTGACAATTTTGGTGAGACTTGTTAAATTGTAATTATCAAATATAGGAGGGGTGTTTTATGTCGGGCAT
TCGTTAGGGTGTTGTTGAGC

Product: acyl-CoA thioester hydrolase (putative)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MEPIHISQTLSITNHRVFSADLNEHDTVFGGKILTTIDDNSSIAASRVARIETVTVSVDQVNFLLPFRLQDSMCAESYVS
GVGHRSIEVFTKIIGEHLKTGERFLGLTCFSTFVVTDRNIELPLLVADKPEYTFVAQGYQERQAARLAKLKRQQDFNAHI
SVELPW

Sequences:

>Translated_166_residues
MEPIHISQTLSITNHRVFSADLNEHDTVFGGKILTTIDDNSSIAASRVARIETVTVSVDQVNFLLPFRLQDSMCAESYVS
GVGHRSIEVFTKIIGEHLKTGERFLGLTCFSTFVVTDRNIELPLLVADKPEYTFVAQGYQERQAARLAKLKRQQDFNAHI
SVELPW
>Mature_166_residues
MEPIHISQTLSITNHRVFSADLNEHDTVFGGKILTTIDDNSSIAASRVARIETVTVSVDQVNFLLPFRLQDSMCAESYVS
GVGHRSIEVFTKIIGEHLKTGERFLGLTCFSTFVVTDRNIELPLLVADKPEYTFVAQGYQERQAARLAKLKRQQDFNAHI
SVELPW

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18666; Mature: 18666

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPIHISQTLSITNHRVFSADLNEHDTVFGGKILTTIDDNSSIAASRVARIETVTVSVDQ
CCCEECCEEEEECCCEEEECCCCCCCEEECCEEEEEECCCCCHHHHHHEEEEEEEEEECC
VNFLLPFRLQDSMCAESYVSGVGHRSIEVFTKIIGEHLKTGERFLGLTCFSTFVVTDRNI
EEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHEEHEEEEEECCCC
ELPLLVADKPEYTFVAQGYQERQAARLAKLKRQQDFNAHISVELPW
EEEEEEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MEPIHISQTLSITNHRVFSADLNEHDTVFGGKILTTIDDNSSIAASRVARIETVTVSVDQ
CCCEECCEEEEECCCEEEECCCCCCCEEECCEEEEEECCCCCHHHHHHEEEEEEEEEECC
VNFLLPFRLQDSMCAESYVSGVGHRSIEVFTKIIGEHLKTGERFLGLTCFSTFVVTDRNI
EEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHEEHEEEEEECCCC
ELPLLVADKPEYTFVAQGYQERQAARLAKLKRQQDFNAHISVELPW
EEEEEEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377; 10568751 [H]