| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28378372
Identifier: 28378372
GI number: 28378372
Start: 1532073
End: 1532624
Strand: Direct
Name: 28378372
Synonym: lp_1682
Alternate gene names: NA
Gene position: 1532073-1532624 (Clockwise)
Preceding gene: 28378371
Following gene: 28378374
Centisome position: 46.31
GC content: 49.46
Gene sequence:
>552_bases ATGCCAATCACTCAAGTTGTCTTTAAACGGCAGTGGCTTCAGATGCCGGTCGATGTTTCTAAAAAAATGCGGCGGGTCAC TCAGCGAACCGTGAGTCGCCAATTAATTCAGCAAGTGTTATCGGTACCATTAGCTTATCATCGATTGGGCCAGCCCTATT TTCCAAGTCATCCTCGATTAGGTGTTAGTGTTAGTCACACGCACCAGTTAGTGATGGTAGCGGTTGGTCCGGGACCTCTG GGGATTGATGTTGAACAGGTCCGTCCATATGATGTGACTGCCATTCGGCGAGCCTTTACATCGGTGGAATGGCAGCTATT ACAGGTTTTATCGGTGCAAGATCGTTATCGGTTAGGGTGGCAACTTTGGACGGCTAAAGAAGCGGTATTAAAGTTAGTGG GCTGTGGCTTGACCCATGCGCCCCGCCGTGTTGAGGTTCTTGATTTAGAACGTGGACTAGCGTGCTATCAAACACAGTTA TACCAGTTGACGCCGTTAGAATTGCCTGCGACTCACGAGGGATTTTTGGCTCGTCCCTTGTCGGTTGGCTGA
Upstream 100 bases:
>100_bases CGCGTGAGATCGGCAACGTGGCTGCCTTTTTATTAAGCAATCTATCGACTGGAATGACCGGGGACGTGGTATACGTGGAT AAAGGGGTCCACTTAAGTTA
Downstream 100 bases:
>100_bases TTGGAGCGTGTTGTTGGTATTAACTTTAGTGCGTTCTTTTTTAAGTTTAGTGAACAATGGCCACTGGATTTTATTATCGG CCGACTGGGTTGACCTGCTA
Product: phosphopantetheinyltransferase
Products: NA
Alternate protein names: Phosphopantetheinyltransferase
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MPITQVVFKRQWLQMPVDVSKKMRRVTQRTVSRQLIQQVLSVPLAYHRLGQPYFPSHPRLGVSVSHTHQLVMVAVGPGPL GIDVEQVRPYDVTAIRRAFTSVEWQLLQVLSVQDRYRLGWQLWTAKEAVLKLVGCGLTHAPRRVEVLDLERGLACYQTQL YQLTPLELPATHEGFLARPLSVG
Sequences:
>Translated_183_residues MPITQVVFKRQWLQMPVDVSKKMRRVTQRTVSRQLIQQVLSVPLAYHRLGQPYFPSHPRLGVSVSHTHQLVMVAVGPGPL GIDVEQVRPYDVTAIRRAFTSVEWQLLQVLSVQDRYRLGWQLWTAKEAVLKLVGCGLTHAPRRVEVLDLERGLACYQTQL YQLTPLELPATHEGFLARPLSVG >Mature_182_residues PITQVVFKRQWLQMPVDVSKKMRRVTQRTVSRQLIQQVLSVPLAYHRLGQPYFPSHPRLGVSVSHTHQLVMVAVGPGPLG IDVEQVRPYDVTAIRRAFTSVEWQLLQVLSVQDRYRLGWQLWTAKEAVLKLVGCGLTHAPRRVEVLDLERGLACYQTQLY QLTPLELPATHEGFLARPLSVG
Specific function: Unknown
COG id: COG2091
COG function: function code H; Phosphopantetheinyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20840; Mature: 20709
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITQVVFKRQWLQMPVDVSKKMRRVTQRTVSRQLIQQVLSVPLAYHRLGQPYFPSHPRL CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCC GVSVSHTHQLVMVAVGPGPLGIDVEQVRPYDVTAIRRAFTSVEWQLLQVLSVQDRYRLGW CEEECCCCEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLWTAKEAVLKLVGCGLTHAPRRVEVLDLERGLACYQTQLYQLTPLELPATHEGFLARPL HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHEECCCCCCCCCCCCCCCCC SVG CCC >Mature Secondary Structure PITQVVFKRQWLQMPVDVSKKMRRVTQRTVSRQLIQQVLSVPLAYHRLGQPYFPSHPRL CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCC GVSVSHTHQLVMVAVGPGPLGIDVEQVRPYDVTAIRRAFTSVEWQLLQVLSVQDRYRLGW CEEECCCCEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLWTAKEAVLKLVGCGLTHAPRRVEVLDLERGLACYQTQLYQLTPLELPATHEGFLARPL HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHEECCCCCCCCCCCCCCCCC SVG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA