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The map label for this gene is oruR [H]

Identifier: 28378359

GI number: 28378359

Start: 1521287

End: 1522273

Strand: Direct

Name: oruR [H]

Synonym: lp_1669

Alternate gene names: 28378359

Gene position: 1521287-1522273 (Clockwise)

Preceding gene: 28378358

Following gene: 28378360

Centisome position: 45.98

GC content: 40.12

Gene sequence:

>987_bases
GTGAAGATTATGGTTTCTGAACAGTTTCAGTGTTTTATGGCAAGCCTTGGCGTTGATTTAAATAGCCTGCTTGAAGCTGC
CGGTATTAATAAAGTGGTTTGGCAAGAACAATTAATGCTTTCTGATGTGGAGTATTGGCAGTTAATGAACGAATTCGACA
ACCAATTGACGGATGAAATGATTCTTAGTTTAGGGAATATTACTAACATTAATACGTTTATGCCGTCCTTTTTTGCAGCA
TTAGCTGCTAAAAATGGTGAACAAGCGATTGCACGCATGGCAACCTATAAATCATTGGCAGGTCCGGTTCATTTAGAGAT
AGTGACCAAGCCAGATATTGTCAATATTCATATTTTGGGAAATAGTCTTGGCGTCGAGTTGCCGCGTTTCACGATTATGA
CGGAACAATTGTTGTTAATCAGCTTGTTACGAGTAGGTACGGGAAAACTCATCAAGCCAATTTCAGTTGGTAGTAAGTAT
CCGTATGGTGATCAGATTGATGCCGTGATGGGCATTCGACCTCAACAATTGGCTGATAATTGCATTCAGTTTCAAGTCAC
GGACTTACAGCGGGCGTTTATTTCGGCCAATAATTCAATGTGGGCATTTTTGCAACCAGGGTTAGACCAACAAAAACTGG
CTATTGAACACAACCAATCATTGCTCGCGACTGTTCAAGCACTATTGTTGAAGAAAATTCCTAGTGGTTCCTTCTCAATT
GACGAGATTGCAACAAGTTTGAATCTCAGTAAACGAACCTTGCAGCGTCATCTTAGTACTTTAAGCACCACATTTAATGA
TGAAGTCCAAATTGCGCGTCGAACCCTAGTGGTACCCTTGATGAAAGATCAATCGCTAAACTTGATTGAAATCAGCTATT
TGTTAGGGTATTCAGACCCAGAGTCTTTTTCGAGAGCTTTTAAAAAATGGTTTCATCAGAGTCCATCCGTTTACCGCCAA
CAATCTCTGGGGATGTTCAAAAATTAA

Upstream 100 bases:

>100_bases
TTGGATTTGGGGCTAAACCGCTGGTACTTGCTAAGGCGATTTTACCGACTCGTGTTTTTGATTTTATCATGATGCATGCC
AGTTAGTAGGAGTGATTAGT

Downstream 100 bases:

>100_bases
CAAGCGTTGCCGTTTAGGTTAAAAGTTATGGGCGTTAAAATCTTATGGATGTGATGGCTTTAGACTGATGAGTAATCCTT
TAAATTAATAGATCGTCACA

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKIMVSEQFQCFMASLGVDLNSLLEAAGINKVVWQEQLMLSDVEYWQLMNEFDNQLTDEMILSLGNITNINTFMPSFFAA
LAAKNGEQAIARMATYKSLAGPVHLEIVTKPDIVNIHILGNSLGVELPRFTIMTEQLLLISLLRVGTGKLIKPISVGSKY
PYGDQIDAVMGIRPQQLADNCIQFQVTDLQRAFISANNSMWAFLQPGLDQQKLAIEHNQSLLATVQALLLKKIPSGSFSI
DEIATSLNLSKRTLQRHLSTLSTTFNDEVQIARRTLVVPLMKDQSLNLIEISYLLGYSDPESFSRAFKKWFHQSPSVYRQ
QSLGMFKN

Sequences:

>Translated_328_residues
MKIMVSEQFQCFMASLGVDLNSLLEAAGINKVVWQEQLMLSDVEYWQLMNEFDNQLTDEMILSLGNITNINTFMPSFFAA
LAAKNGEQAIARMATYKSLAGPVHLEIVTKPDIVNIHILGNSLGVELPRFTIMTEQLLLISLLRVGTGKLIKPISVGSKY
PYGDQIDAVMGIRPQQLADNCIQFQVTDLQRAFISANNSMWAFLQPGLDQQKLAIEHNQSLLATVQALLLKKIPSGSFSI
DEIATSLNLSKRTLQRHLSTLSTTFNDEVQIARRTLVVPLMKDQSLNLIEISYLLGYSDPESFSRAFKKWFHQSPSVYRQ
QSLGMFKN
>Mature_328_residues
MKIMVSEQFQCFMASLGVDLNSLLEAAGINKVVWQEQLMLSDVEYWQLMNEFDNQLTDEMILSLGNITNINTFMPSFFAA
LAAKNGEQAIARMATYKSLAGPVHLEIVTKPDIVNIHILGNSLGVELPRFTIMTEQLLLISLLRVGTGKLIKPISVGSKY
PYGDQIDAVMGIRPQQLADNCIQFQVTDLQRAFISANNSMWAFLQPGLDQQKLAIEHNQSLLATVQALLLKKIPSGSFSI
DEIATSLNLSKRTLQRHLSTLSTTFNDEVQIARRTLVVPLMKDQSLNLIEISYLLGYSDPESFSRAFKKWFHQSPSVYRQ
QSLGMFKN

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36809; Mature: 36809

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMVSEQFQCFMASLGVDLNSLLEAAGINKVVWQEQLMLSDVEYWQLMNEFDNQLTDEM
CEEEEHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSLGNITNINTFMPSFFAALAAKNGEQAIARMATYKSLAGPVHLEIVTKPDIVNIHILG
HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEC
NSLGVELPRFTIMTEQLLLISLLRVGTGKLIKPISVGSKYPYGDQIDAVMGIRPQQLADN
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHH
CIQFQVTDLQRAFISANNSMWAFLQPGLDQQKLAIEHNQSLLATVQALLLKKIPSGSFSI
HHEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCH
DEIATSLNLSKRTLQRHLSTLSTTFNDEVQIARRTLVVPLMKDQSLNLIEISYLLGYSDP
HHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCEEEEEEHHCCCCH
ESFSRAFKKWFHQSPSVYRQQSLGMFKN
HHHHHHHHHHHCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MKIMVSEQFQCFMASLGVDLNSLLEAAGINKVVWQEQLMLSDVEYWQLMNEFDNQLTDEM
CEEEEHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSLGNITNINTFMPSFFAALAAKNGEQAIARMATYKSLAGPVHLEIVTKPDIVNIHILG
HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEC
NSLGVELPRFTIMTEQLLLISLLRVGTGKLIKPISVGSKYPYGDQIDAVMGIRPQQLADN
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHH
CIQFQVTDLQRAFISANNSMWAFLQPGLDQQKLAIEHNQSLLATVQALLLKKIPSGSFSI
HHEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCH
DEIATSLNLSKRTLQRHLSTLSTTFNDEVQIARRTLVVPLMKDQSLNLIEISYLLGYSDP
HHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCEEEEEEHHCCCCH
ESFSRAFKKWFHQSPSVYRQQSLGMFKN
HHHHHHHHHHHCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]