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The map label for this gene is ytmP [H]

Identifier: 28378176

GI number: 28378176

Start: 1333566

End: 1334351

Strand: Direct

Name: ytmP [H]

Synonym: lp_1457

Alternate gene names: 28378176

Gene position: 1333566-1334351 (Clockwise)

Preceding gene: 28378175

Following gene: 28378177

Centisome position: 40.31

GC content: 45.17

Gene sequence:

>786_bases
ATGGATTTCGAACTTGATGATGGCTGGGACGTTTACCCGATCTATGGGAATACGAATAAAGCTTTCATGGGCAAAAAAAA
TCACCAACGATTGTTCTTAAAGCGAAACGCCTCGCCGTTCCTAGCGGCGCTGTCGATGGAAGAAATTACCCCGCGATTAA
TCTGGACGAAGCGTATCTCAAGCGGGGATACGCTGACAGCCCAAGAGTGGTTGAATGGTCAAACTTTAACGAAGCAACAA
ATGCGGCTGCCTGAAGTGGCGCATTTATTGGCACGTGTGCACAATTCCGAGTTGCTTCACCGGATGTTAAGAAAAGTCGG
TGGTCAGAGTGTCCGCCCACAAGACTTTATTCAGCAATACTTACAAGATTTACCAGATGATTTACGGCACCATCCGTTAA
TGGCCCGGGTTCTGGATGAATTAAGAGGAACCGCACCCACTTTACCGGCCACTGATTATCGCGTTTGTCACGGTGATCTT
AACCACAAGAACTGGTTACTATCTGATCGCCAACAACTGTACTTGGTTGACTGGGATTCCGCACGATTTGCGGATCCGGC
GTCAGATATTAGTATGCTACTATGCGAATATGTCCCGTTAAGTGATTGGCAACAGTGGCTTAGTGAATACGGTGAGACTA
TGACGACCGCCTTACGGACGCGAGTGGTCTGGTATGCTAAGATCAATTTACTATTGAATATCAAAGATAATTATTATCGG
AATCAGTACCATCAGATGAACCATGAAATTATCTTTTTAGAAGAATTATCGCAGTACGAAGTGTAA

Upstream 100 bases:

>100_bases
GTTAAAAAGGACTTGACGGATTCAGCTTTCGTCTATAAAATGTGATTGTTAAGTCAAATAATAATGAGTCATTAAATAAA
TTTTGAGAGGAGTGGGGCTG

Downstream 100 bases:

>100_bases
CGACGAGCAACAAAATCGCCGCGAGTCCCAGATGGAATTCGCGGCGATTTTGTTGAGTAAGCAAATGAAGAAGGAGTCAA
TCAAGATGCGTGTCAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MDFELDDGWDVYPIYGNTNKAFMGKKNHQRLFLKRNASPFLAALSMEEITPRLIWTKRISSGDTLTAQEWLNGQTLTKQQ
MRLPEVAHLLARVHNSELLHRMLRKVGGQSVRPQDFIQQYLQDLPDDLRHHPLMARVLDELRGTAPTLPATDYRVCHGDL
NHKNWLLSDRQQLYLVDWDSARFADPASDISMLLCEYVPLSDWQQWLSEYGETMTTALRTRVVWYAKINLLLNIKDNYYR
NQYHQMNHEIIFLEELSQYEV

Sequences:

>Translated_261_residues
MDFELDDGWDVYPIYGNTNKAFMGKKNHQRLFLKRNASPFLAALSMEEITPRLIWTKRISSGDTLTAQEWLNGQTLTKQQ
MRLPEVAHLLARVHNSELLHRMLRKVGGQSVRPQDFIQQYLQDLPDDLRHHPLMARVLDELRGTAPTLPATDYRVCHGDL
NHKNWLLSDRQQLYLVDWDSARFADPASDISMLLCEYVPLSDWQQWLSEYGETMTTALRTRVVWYAKINLLLNIKDNYYR
NQYHQMNHEIIFLEELSQYEV
>Mature_261_residues
MDFELDDGWDVYPIYGNTNKAFMGKKNHQRLFLKRNASPFLAALSMEEITPRLIWTKRISSGDTLTAQEWLNGQTLTKQQ
MRLPEVAHLLARVHNSELLHRMLRKVGGQSVRPQDFIQQYLQDLPDDLRHHPLMARVLDELRGTAPTLPATDYRVCHGDL
NHKNWLLSDRQQLYLVDWDSARFADPASDISMLLCEYVPLSDWQQWLSEYGETMTTALRTRVVWYAKINLLLNIKDNYYR
NQYHQMNHEIIFLEELSQYEV

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 30764; Mature: 30764

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFELDDGWDVYPIYGNTNKAFMGKKNHQRLFLKRNASPFLAALSMEEITPRLIWTKRIS
CCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHEEEEECC
SGDTLTAQEWLNGQTLTKQQMRLPEVAHLLARVHNSELLHRMLRKVGGQSVRPQDFIQQY
CCCCEEHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LQDLPDDLRHHPLMARVLDELRGTAPTLPATDYRVCHGDLNHKNWLLSDRQQLYLVDWDS
HHHCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEECCCCEEEEEECCC
ARFADPASDISMLLCEYVPLSDWQQWLSEYGETMTTALRTRVVWYAKINLLLNIKDNYYR
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHH
NQYHQMNHEIIFLEELSQYEV
HHHHHCCCCEEEEECHHHCCC
>Mature Secondary Structure
MDFELDDGWDVYPIYGNTNKAFMGKKNHQRLFLKRNASPFLAALSMEEITPRLIWTKRIS
CCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHEEEEECC
SGDTLTAQEWLNGQTLTKQQMRLPEVAHLLARVHNSELLHRMLRKVGGQSVRPQDFIQQY
CCCCEEHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LQDLPDDLRHHPLMARVLDELRGTAPTLPATDYRVCHGDLNHKNWLLSDRQQLYLVDWDS
HHHCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEECCCCEEEEEECCC
ARFADPASDISMLLCEYVPLSDWQQWLSEYGETMTTALRTRVVWYAKINLLLNIKDNYYR
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHH
NQYHQMNHEIIFLEELSQYEV
HHHHHCCCCEEEEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]