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The map label for this gene is yggA [C]

Identifier: 28378138

GI number: 28378138

Start: 1289924

End: 1290532

Strand: Direct

Name: yggA [C]

Synonym: lp_1409

Alternate gene names: 28378138

Gene position: 1289924-1290532 (Clockwise)

Preceding gene: 28378133

Following gene: 28378139

Centisome position: 38.99

GC content: 46.47

Gene sequence:

>609_bases
ATGCAAGTGTTTTTACAAGGATTATTATTTGGAATTGTTTACATTGCACCAATCGGGATGCAAAACTTATTTGTGGTTTC
GACAGCTATTGAACAACCATTGCAACGGGCATTGCGGGTGGCTTTAATTGTAATTGCGTTCGATACGTCGCTCTCCCTGG
CTTGCTTTTATGGGGTGGGCCGATTGTTGCAGACCACTCCCTGGCTCGAATTAGGGGTGTTGTTGATTGGGAGTTTATTG
GTCTTTTACATTGGCTGGAATCTGTTGCGGAAAAAGGCCACGGCAATGGGGACCCTCGACGCGGACTTTTCATATAAAGC
AGCGATTCTGACAGCTTTTTCGGTAGCATGGCTGAATCCGCAAGCACTGATTGATGGTTCCGTGTTGTTGGCGGCGTTTC
GGGTGTCAATCCCGGCGGCACTGACCCATTTCTTTATGTTGGGGGTCATCCTAGCATCCATTATTTGGTTCATCGGTCTG
ACCAGCTTGATCAGTAAGTTTAAACATCTCATGCAACCACGAGTCCTACTCTGGATCAATCGAATCTGTGGTGGCATCAT
TATTCTATACGGCGTGCAGTTGCTAGCAACCTTCATCACGAAAATATAG

Upstream 100 bases:

>100_bases
AATCATCTCTGAATTAAAAGCTAGTCGGATATGACCAATTGATTGAACGATAATTGGTTGGTAAAAGAATCGAATTGGCT
GGTCTTAAGGAGGTCAAAAC

Downstream 100 bases:

>100_bases
TTGCGGTTACCTCTGACAATCGGTATGCTAGTCGTATTGGACTTTTTATGAGAGGGACGATACGCATGAAGATTGCTGGT
TTCGGAGTGGAGGCCTGGTT

Product: amino acid efflux protein

Products: NA

Alternate protein names: Arginine Exporter Protein; Translocator Protein LysE Family; Lysine Exporter Protein; Amino Acid Efflux Protein; Lysine Exporter Protein LysE/YggA; LysE Family Lysine Exporter; Lysine Efflux Transporter; Amino Acid Export Protein; LysE Family L-Lysine Exporter

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MQVFLQGLLFGIVYIAPIGMQNLFVVSTAIEQPLQRALRVALIVIAFDTSLSLACFYGVGRLLQTTPWLELGVLLIGSLL
VFYIGWNLLRKKATAMGTLDADFSYKAAILTAFSVAWLNPQALIDGSVLLAAFRVSIPAALTHFFMLGVILASIIWFIGL
TSLISKFKHLMQPRVLLWINRICGGIIILYGVQLLATFITKI

Sequences:

>Translated_202_residues
MQVFLQGLLFGIVYIAPIGMQNLFVVSTAIEQPLQRALRVALIVIAFDTSLSLACFYGVGRLLQTTPWLELGVLLIGSLL
VFYIGWNLLRKKATAMGTLDADFSYKAAILTAFSVAWLNPQALIDGSVLLAAFRVSIPAALTHFFMLGVILASIIWFIGL
TSLISKFKHLMQPRVLLWINRICGGIIILYGVQLLATFITKI
>Mature_202_residues
MQVFLQGLLFGIVYIAPIGMQNLFVVSTAIEQPLQRALRVALIVIAFDTSLSLACFYGVGRLLQTTPWLELGVLLIGSLL
VFYIGWNLLRKKATAMGTLDADFSYKAAILTAFSVAWLNPQALIDGSVLLAAFRVSIPAALTHFFMLGVILASIIWFIGL
TSLISKFKHLMQPRVLLWINRICGGIIILYGVQLLATFITKI

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789290, Length=160, Percent_Identity=30, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22246; Mature: 22246

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFLQGLLFGIVYIAPIGMQNLFVVSTAIEQPLQRALRVALIVIAFDTSLSLACFYGVG
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RLLQTTPWLELGVLLIGSLLVFYIGWNLLRKKATAMGTLDADFSYKAAILTAFSVAWLNP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCH
QALIDGSVLLAAFRVSIPAALTHFFMLGVILASIIWFIGLTSLISKFKHLMQPRVLLWIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
RICGGIIILYGVQLLATFITKI
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQVFLQGLLFGIVYIAPIGMQNLFVVSTAIEQPLQRALRVALIVIAFDTSLSLACFYGVG
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RLLQTTPWLELGVLLIGSLLVFYIGWNLLRKKATAMGTLDADFSYKAAILTAFSVAWLNP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCH
QALIDGSVLLAAFRVSIPAALTHFFMLGVILASIIWFIGLTSLISKFKHLMQPRVLLWIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
RICGGIIILYGVQLLATFITKI
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA