| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is cps1I
Identifier: 28377959
GI number: 28377959
Start: 1082317
End: 1083483
Strand: Direct
Name: cps1I
Synonym: lp_1185
Alternate gene names: NA
Gene position: 1082317-1083483 (Clockwise)
Preceding gene: 28377958
Following gene: 28377960
Centisome position: 32.72
GC content: 34.96
Gene sequence:
>1167_bases ATGTTGTTGACGCATTCAACTGGTAATAAAACTTCACAGGTTGAAAGTGTACGGGAAAAGTTTTTTTTCTTGTTATACGC GGCCTATGAGATTACGTATTATATTTTTGGGCAAAGTACCATAAATACGTTCTTTAACACTTCATCTATTACTTTTTCTG TTAACCTTCTAGTTATTATCGGATTAACTTTCTTTGTAGCCACCAACAAGTACGATCTAATCCAGTTTGTACTAATATTT GTTGGTATAATTATGGGGTTATATGCATACTCAGTGTTGCGACTTAATGTGTTATTAATTACTGTGTTATTCATGGCGGC TGCAAAAAATATACATTTAAATCAATTTATACAAAAGGATTTTATGCTCAGAACGATACTTCTTGTGGGAATAATTTTGG CAAACCGCTTAGGGTTTGTGCCAAGTAATACAGGCTTAAGAGTTGGAACAATAACAATTGTGAGAGATTCACTAGGGTTT GGACAGTTTAATATTACGGGTGCACTGATAATGATCTGTGTGCTTGAATACGTTTATTTGAACTTTCAACGCATGACCTC TTTAGCTTATCAGTGGATTGTTATTATTATCGTCTTAACTTTGGCGCTTACAAATTCTCGTGGTTCCATGCTCGCAGCCA CATTGTACACATTAGCCTCGTGGTTGTTTCAGCACCACAATAAGGAAGCCAGGTATTGGACAAAAAAACTAATCGGGTAC GCAAAGTATATGTTTGGCTTTCTGACAGTTGTTTCGACGATAGCAGTTGTACTTTTCTCGTATAAGAGTACCATGTGGCA GTTTATCAACAAAGTCACATCGGATAGAATCAATATACTAAACCAATATTATGAGAAGTTTGGTATTCATATACTTCCGC AACAGGTAACGAATTACAGATCCGCAGGCATTATTGTCATGGATAATATCTATGTTACCCTCGCAATTCAGTATGGCTTG ATTGTAATTCTGTTATTTGTTATCTATTATTATATAGTGTGTGCAGAAGCATTGAAGAAAAATAACATACAGTTTATTTT GATGCTAGTTGCTCTAATGATTTTTGGCATCATCGAATCTTCGTTTTTCATTGTTGGTATCAACTTTACTGTGATGATGA TTTTTTCTAATATGTCTGTCATGCCAAATTCTAGTTTGGAGGAGTAG
Upstream 100 bases:
>100_bases CTTCCAATTATTCAAAATAATTTCAAAAAGCACACCTGGCCGGGTACAATTGCACTAAATTTAGCATTATTACGACGCAA GAAATCATAAGAAAGGAGGG
Downstream 100 bases:
>100_bases TTAGTATGAAAGGAATTATATTAGCTGGTGGTTCAGGGACTCGTTTATATCCAGTAACAAAGGTTACTTCCAAACAGTTG TTACCCATTTATGATAAGCC
Product: polysaccharide polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MLLTHSTGNKTSQVESVREKFFFLLYAAYEITYYIFGQSTINTFFNTSSITFSVNLLVIIGLTFFVATNKYDLIQFVLIF VGIIMGLYAYSVLRLNVLLITVLFMAAAKNIHLNQFIQKDFMLRTILLVGIILANRLGFVPSNTGLRVGTITIVRDSLGF GQFNITGALIMICVLEYVYLNFQRMTSLAYQWIVIIIVLTLALTNSRGSMLAATLYTLASWLFQHHNKEARYWTKKLIGY AKYMFGFLTVVSTIAVVLFSYKSTMWQFINKVTSDRINILNQYYEKFGIHILPQQVTNYRSAGIIVMDNIYVTLAIQYGL IVILLFVIYYYIVCAEALKKNNIQFILMLVALMIFGIIESSFFIVGINFTVMMIFSNMSVMPNSSLEE
Sequences:
>Translated_388_residues MLLTHSTGNKTSQVESVREKFFFLLYAAYEITYYIFGQSTINTFFNTSSITFSVNLLVIIGLTFFVATNKYDLIQFVLIF VGIIMGLYAYSVLRLNVLLITVLFMAAAKNIHLNQFIQKDFMLRTILLVGIILANRLGFVPSNTGLRVGTITIVRDSLGF GQFNITGALIMICVLEYVYLNFQRMTSLAYQWIVIIIVLTLALTNSRGSMLAATLYTLASWLFQHHNKEARYWTKKLIGY AKYMFGFLTVVSTIAVVLFSYKSTMWQFINKVTSDRINILNQYYEKFGIHILPQQVTNYRSAGIIVMDNIYVTLAIQYGL IVILLFVIYYYIVCAEALKKNNIQFILMLVALMIFGIIESSFFIVGINFTVMMIFSNMSVMPNSSLEE >Mature_388_residues MLLTHSTGNKTSQVESVREKFFFLLYAAYEITYYIFGQSTINTFFNTSSITFSVNLLVIIGLTFFVATNKYDLIQFVLIF VGIIMGLYAYSVLRLNVLLITVLFMAAAKNIHLNQFIQKDFMLRTILLVGIILANRLGFVPSNTGLRVGTITIVRDSLGF GQFNITGALIMICVLEYVYLNFQRMTSLAYQWIVIIIVLTLALTNSRGSMLAATLYTLASWLFQHHNKEARYWTKKLIGY AKYMFGFLTVVSTIAVVLFSYKSTMWQFINKVTSDRINILNQYYEKFGIHILPQQVTNYRSAGIIVMDNIYVTLAIQYGL IVILLFVIYYYIVCAEALKKNNIQFILMLVALMIFGIIESSFFIVGINFTVMMIFSNMSVMPNSSLEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44350; Mature: 44350
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTHSTGNKTSQVESVREKFFFLLYAAYEITYYIFGQSTINTFFNTSSITFSVNLLVII CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHCCCCEEEEEHHHHHHH GLTFFVATNKYDLIQFVLIFVGIIMGLYAYSVLRLNVLLITVLFMAAAKNIHLNQFIQKD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FMLRTILLVGIILANRLGFVPSNTGLRVGTITIVRDSLGFGQFNITGALIMICVLEYVYL HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH NFQRMTSLAYQWIVIIIVLTLALTNSRGSMLAATLYTLASWLFQHHNKEARYWTKKLIGY HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AKYMFGFLTVVSTIAVVLFSYKSTMWQFINKVTSDRINILNQYYEKFGIHILPQQVTNYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHCCCC SAGIIVMDNIYVTLAIQYGLIVILLFVIYYYIVCAEALKKNNIQFILMLVALMIFGIIES CCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC SFFIVGINFTVMMIFSNMSVMPNSSLEE CEEEEEHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLLTHSTGNKTSQVESVREKFFFLLYAAYEITYYIFGQSTINTFFNTSSITFSVNLLVII CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHCCCCEEEEEHHHHHHH GLTFFVATNKYDLIQFVLIFVGIIMGLYAYSVLRLNVLLITVLFMAAAKNIHLNQFIQKD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FMLRTILLVGIILANRLGFVPSNTGLRVGTITIVRDSLGFGQFNITGALIMICVLEYVYL HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH NFQRMTSLAYQWIVIIIVLTLALTNSRGSMLAATLYTLASWLFQHHNKEARYWTKKLIGY HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AKYMFGFLTVVSTIAVVLFSYKSTMWQFINKVTSDRINILNQYYEKFGIHILPQQVTNYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHCCCC SAGIIVMDNIYVTLAIQYGLIVILLFVIYYYIVCAEALKKNNIQFILMLVALMIFGIIES CCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC SFFIVGINFTVMMIFSNMSVMPNSSLEE CEEEEEHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA