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The map label for this gene is 28377805

Identifier: 28377805

GI number: 28377805

Start: 918586

End: 919050

Strand: Direct

Name: 28377805

Synonym: lp_0992

Alternate gene names: NA

Gene position: 918586-919050 (Clockwise)

Preceding gene: 28377801

Following gene: 28377808

Centisome position: 27.77

GC content: 42.15

Gene sequence:

>465_bases
GTGGATAAGCAAGAAGACGGTGTATTTTTTAAGAAATTTAAAGAACAGCTGGGTAAGCATCAATTCACAATCGGAATTAG
CGATTTGGCGAAGATGACCGGCGTCTCTCAGACACAGCTACGTTACTGGGAACAGAAAAATTATATTCATAGTCTTAAAG
TGAGTGAGAAGAATACCACGCATCGTTATTCGTATGGTATGCTGATGCGTGTTCATTTTATCAAGATGATGTTAGACGAG
GGTTTTACACTGGCAGCGGCTGTCGAGCGGGCCGATGGGTATAATAACCAAATGGAAATGATGCGCATCTTTATGATGAC
GGCTTTTCAAGGAATCGAAGAACGGGATGGTCACCACATGGTCAAGTTGGGATATTTTGACGAAGCGAAGACACAACAGC
TTTATTGTTATATTCAAGATGAGACGCCACATTATCGACTTTATCCCGTTAAGTCAGAGCGCTAG

Upstream 100 bases:

>100_bases
TGTCTAATATAATCGGATTTATCGACTTTGTCAACAAACTTGACATTAATATTAAAAATAATATACTGAGTATTGAAAAT
GTTAGAAAAGAGGTTGACCC

Downstream 100 bases:

>100_bases
CAACCTTCAGCTTGTGTAACCGATTAATTAATGTTAAATTTAAGTTGGTAAATGTCGGTAAGTCACTTGGGCATTTAAGT
TTCCCGTTCGTCAACCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator Family Protein; Transcriptional Regulator Merr Family

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDKQEDGVFFKKFKEQLGKHQFTIGISDLAKMTGVSQTQLRYWEQKNYIHSLKVSEKNTTHRYSYGMLMRVHFIKMMLDE
GFTLAAAVERADGYNNQMEMMRIFMMTAFQGIEERDGHHMVKLGYFDEAKTQQLYCYIQDETPHYRLYPVKSER

Sequences:

>Translated_154_residues
MDKQEDGVFFKKFKEQLGKHQFTIGISDLAKMTGVSQTQLRYWEQKNYIHSLKVSEKNTTHRYSYGMLMRVHFIKMMLDE
GFTLAAAVERADGYNNQMEMMRIFMMTAFQGIEERDGHHMVKLGYFDEAKTQQLYCYIQDETPHYRLYPVKSER
>Mature_154_residues
MDKQEDGVFFKKFKEQLGKHQFTIGISDLAKMTGVSQTQLRYWEQKNYIHSLKVSEKNTTHRYSYGMLMRVHFIKMMLDE
GFTLAAAVERADGYNNQMEMMRIFMMTAFQGIEERDGHHMVKLGYFDEAKTQQLYCYIQDETPHYRLYPVKSER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18362; Mature: 18362

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQEDGVFFKKFKEQLGKHQFTIGISDLAKMTGVSQTQLRYWEQKNYIHSLKVSEKNTT
CCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCC
HRYSYGMLMRVHFIKMMLDEGFTLAAAVERADGYNNQMEMMRIFMMTAFQGIEERDGHHM
EEHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE
VKLGYFDEAKTQQLYCYIQDETPHYRLYPVKSER
EEEECCCCCCCEEEEEEEECCCCCEEEEECCCCC
>Mature Secondary Structure
MDKQEDGVFFKKFKEQLGKHQFTIGISDLAKMTGVSQTQLRYWEQKNYIHSLKVSEKNTT
CCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCC
HRYSYGMLMRVHFIKMMLDEGFTLAAAVERADGYNNQMEMMRIFMMTAFQGIEERDGHHM
EEHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE
VKLGYFDEAKTQQLYCYIQDETPHYRLYPVKSER
EEEECCCCCCCEEEEEEEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA