| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377800
Identifier: 28377800
GI number: 28377800
Start: 913141
End: 913359
Strand: Direct
Name: 28377800
Synonym: lp_0984
Alternate gene names: NA
Gene position: 913141-913359 (Clockwise)
Preceding gene: 28377791
Following gene: 28377801
Centisome position: 27.6
GC content: 44.29
Gene sequence:
>219_bases ATGACTCTGGAACAATTAGCAGCCCATAGCGGGGTCGCTGCTGATAAAATCGTCGCCTATACCAATGCCGGGTTATTACC TTGCAAGGATGTCAACGCGCATTTTAGCGCCGATGATGAATATTGGCTAGATATGGTCAATTGCTTCTTAGAAAATGGCT CATCCGTCGAGGATTTGAAAGATTTAATGCCACTTTGTGAACAGTGTGCAGCTCAATAA
Upstream 100 bases:
>100_bases ACTTTTAATCGTGACGTTACGAAATTGTTGCTTGCATTTCAAAAGCTGGGGGCGTAACATAATCACATTGATTTTTTGAA AGGACAAATGGTGAGAGAAA
Downstream 100 bases:
>100_bases ATAAGTAAGTTAAGACAATCGCACCGATTCTACTAGAATTGGTGCGATTGTTTTTTTATTACTCATCGTTATTAAACAAT CATGATTAAAACGTGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MTLEQLAAHSGVAADKIVAYTNAGLLPCKDVNAHFSADDEYWLDMVNCFLENGSSVEDLKDLMPLCEQCAAQ
Sequences:
>Translated_72_residues MTLEQLAAHSGVAADKIVAYTNAGLLPCKDVNAHFSADDEYWLDMVNCFLENGSSVEDLKDLMPLCEQCAAQ >Mature_71_residues TLEQLAAHSGVAADKIVAYTNAGLLPCKDVNAHFSADDEYWLDMVNCFLENGSSVEDLKDLMPLCEQCAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7836; Mature: 7705
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEQLAAHSGVAADKIVAYTNAGLLPCKDVNAHFSADDEYWLDMVNCFLENGSSVEDLK CCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH DLMPLCEQCAAQ HHHHHHHHHCCC >Mature Secondary Structure TLEQLAAHSGVAADKIVAYTNAGLLPCKDVNAHFSADDEYWLDMVNCFLENGSSVEDLK CHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH DLMPLCEQCAAQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA