| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377790
Identifier: 28377790
GI number: 28377790
Start: 901682
End: 902305
Strand: Direct
Name: 28377790
Synonym: lp_0970
Alternate gene names: NA
Gene position: 901682-902305 (Clockwise)
Preceding gene: 28377789
Following gene: 28377791
Centisome position: 27.26
GC content: 49.04
Gene sequence:
>624_bases TTGACGATGACCGCGGGATTTGCTACGGTTGAGAAAACAGTTGGGAGCGTTGTGATGATGGAAATTCGAACGGCACAACC GCAAGATAGTGCTCAAATTGCACCATTGATTGCGATGATTTACCGTGATATGGAAATGCCAGTTTTAAAAAATGTTAGCG AGGCCGACCTATTGGCAATGTTGACTGAGTTGTATCAGCGACCGGCCAATTTAGATGGGTTAGCGCAGACTTTTGTGGCG GTCATGGATCACAAAATCGTCGGTGTCGCGTTCGGGCACTTAGCGAAGAATGAAGTCGCTGTAAACGATTTGTTGCGGAC GACTTCAGGTCATCATGCGGGGTTTGAGGCACCACTGGAATTAGGTGGTGAGACCCGGCCGAATGAGTGGTATTTAAGCA TGTTGGCAGTTGATCCGCAAGCTCAGGGCCACGGAGTTGGTAGTGCCTTACTAGAAGCATTACCAGGACTAGTTGGTCAA CTGGGGGCCACGAAACTGAGTTTAAACGTTGATGATGGCAATCCCCGGGCAGCTAAGTTATACCACCGGCATGGTTTTGT CCCGGATGGTCAGCTCATGATTGGCACACATCCGTACCAGCACTTGGTTAAGCCTTTATCATAA
Upstream 100 bases:
>100_bases TATTAATGGTATTATTCTCGTTAATTGGCGTTATCCTGGTAGTTCCCGTCACGACGTGGGTGATGACGATTCAACATCGG CAACAAATTAAGCACAACGA
Downstream 100 bases:
>100_bases TAACTGAAATATCGTGGTGTGTTTCTTAGACCACGGTATTTTTTTACGTCATTATGGCACTGAAGACTTTTCTATTGAGC ATGACACAGTTAGAATTAAA
Product: acetyltransferase (putative)
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Acetyltransferase Gnat Family; GNAT Family N-Acetyltransferase; Acetyltransferase Family Protein
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTMTAGFATVEKTVGSVVMMEIRTAQPQDSAQIAPLIAMIYRDMEMPVLKNVSEADLLAMLTELYQRPANLDGLAQTFVA VMDHKIVGVAFGHLAKNEVAVNDLLRTTSGHHAGFEAPLELGGETRPNEWYLSMLAVDPQAQGHGVGSALLEALPGLVGQ LGATKLSLNVDDGNPRAAKLYHRHGFVPDGQLMIGTHPYQHLVKPLS
Sequences:
>Translated_207_residues MTMTAGFATVEKTVGSVVMMEIRTAQPQDSAQIAPLIAMIYRDMEMPVLKNVSEADLLAMLTELYQRPANLDGLAQTFVA VMDHKIVGVAFGHLAKNEVAVNDLLRTTSGHHAGFEAPLELGGETRPNEWYLSMLAVDPQAQGHGVGSALLEALPGLVGQ LGATKLSLNVDDGNPRAAKLYHRHGFVPDGQLMIGTHPYQHLVKPLS >Mature_206_residues TMTAGFATVEKTVGSVVMMEIRTAQPQDSAQIAPLIAMIYRDMEMPVLKNVSEADLLAMLTELYQRPANLDGLAQTFVAV MDHKIVGVAFGHLAKNEVAVNDLLRTTSGHHAGFEAPLELGGETRPNEWYLSMLAVDPQAQGHGVGSALLEALPGLVGQL GATKLSLNVDDGNPRAAKLYHRHGFVPDGQLMIGTHPYQHLVKPLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22275; Mature: 22144
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTAGFATVEKTVGSVVMMEIRTAQPQDSAQIAPLIAMIYRDMEMPVLKNVSEADLLAM CCCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHH LTELYQRPANLDGLAQTFVAVMDHKIVGVAFGHLAKNEVAVNDLLRTTSGHHAGFEAPLE HHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHH LGGETRPNEWYLSMLAVDPQAQGHGVGSALLEALPGLVGQLGATKLSLNVDDGNPRAAKL CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH YHRHGFVPDGQLMIGTHPYQHLVKPLS HHHCCCCCCCCEEECCCCHHHHHCCCC >Mature Secondary Structure TMTAGFATVEKTVGSVVMMEIRTAQPQDSAQIAPLIAMIYRDMEMPVLKNVSEADLLAM CCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHH LTELYQRPANLDGLAQTFVAVMDHKIVGVAFGHLAKNEVAVNDLLRTTSGHHAGFEAPLE HHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHH LGGETRPNEWYLSMLAVDPQAQGHGVGSALLEALPGLVGQLGATKLSLNVDDGNPRAAKL CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH YHRHGFVPDGQLMIGTHPYQHLVKPLS HHHCCCCCCCCEEECCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA