| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
Click here to switch to the map view.
The map label for this gene is 28377751
Identifier: 28377751
GI number: 28377751
Start: 854229
End: 856649
Strand: Direct
Name: 28377751
Synonym: lp_0923
Alternate gene names: NA
Gene position: 854229-856649 (Clockwise)
Preceding gene: 28377749
Following gene: 28377752
Centisome position: 25.82
GC content: 49.44
Gene sequence:
>2421_bases ATGAATAAGAAATTATTGTATACCAGTATTACCACTGCGGCATTATTCGTGGGGACCCAATTGGGTGTTAACAATGCGCA GGCCGACACGGCAACTGATAACAGCGATACGACGAATCAGACGAGTGCCACGCAGGGGAGCGCTCAGACGGCAACTAACG AAAAGTTAGCAACGGTCAAACCGACTAGTCAGCAACAGTATCAAGCCAACGTGCAGACTGCCAAGGGGAACGTAGCCACG GCTCAAAACCAAGTCAATACAACACAAACTAAAGTGGCGACTGCGCAGGGGCAAGTGACTAATCAAAGTCAATTAGTTGC GATTGGACAGTCCCAGTATGATGCTGGTAAAGCCCAAGTTGACCGTGCACAACAAACACTGGATGCTAACAATCAGGTCC TCGCTGAGGCTGAGAATAAAGTCGACGCTGCTAAGTCGCAAACGGCAGCAGCTGAAACACAAATTCCAGCTGACCAACAG CAAATTGCGGCCAACAAAGTCGCTATCGCCAACCAGCCAGCTACCGAGAAGAAAGCACAAACGGCTAAGGACGCGGCTGT CACGGCCTTGACGCAAGCTAAAACTGAACAGGCCACGGCCCAATCTGATGCCGATGCAGCCAGTGCCGTCACTGCCGCTA AACAGGCGACGGTTGACCAAGCATCTGCCGCCCAGCAAAAAGCGGCCACCCAAGCAAATCAAGCTAAAGTGGCCGTAGCA TCAGCGCAAGATGCGGTTAATAAAAATACCCAGGCAATCAATTCTGCCAAGACAGCGATTCAAAATACGACCAGTCAAAT TAATGCGAATAATCAAGCTGTTTCCACAGCGCAAGCCAAAGTGACCGCAGCTCAAGCAGCTTTAGCGGCAGCAGAACGGC CAACGACCACGACAGAATCGCAAAATAAGTATGACGCTGCCGAATTCCCACAATCTCAATTGACTGGGGCCGAAACAGTC AGCGTCGCCTATCCAAGTAATGGCAAGTATGTGCCTAATGCGGATAAAATCAATCAGTATATGTTTGAATATATCAATCA GCTACGGGCGCTGAATGGTCAACCAGCATTGAAACAGACGTCGACGTTGCAAAATAATGCGATTGCGCGAGCAGCTGCCC AAGTCGACGGTGGCTTGGATCATACTGGCTCAAGTTATGCAGAAAATTTAACACAAGTTTATCCGCAATGGTTCATGAGC GATCAAGAAACGGCCTATAATGCTGTGATGGGTTGGTATGATGAATCCAATAACGTTGAGTCCGGTTCCTTTGGTCACCG CGTCAACCTAATATACTCGACTGGTGATGCCGGAGTAGCCATCAACTTGGCCAAACACGTGGCGGCATTTGAAGTCGATA ATGCCGGGATGACGGAAGCGCAGCAAGACAAGTATGTTGATTTGTTCGACAATGCCCATACGAATGCCGCTACTGGGACT AAGGCCTTACCAGCTGTCACGTTCAATTACGTCCAGACGACCCCCGCTGATCCGAAGAAGATTGCAGCGGCTAACGCAAC GTTGATTGCTGCAACGGCTAGTTTGAATGGTTTACAAAATACCGGGAAGACATTAGCAACCACGCTGGCTAACCAAAATG CCAGTTTACAAGCTTTACAAAACCAGACAAGTGGCTTACAAGCGACTGTTACGACTAAACAGGCCCAAGTTCAAGTCGCT GCAACTAGTTTGAAAGCGGCTAATGTTGCTTTGACGCAAGCTCAAGGGCAATTAGCAACGGCGCAACAGCAACAATTATC GCCCGTTCGTAATTTGAAGACATCAATCGCGAAGACGGCTGCGGCACAAGTAACTGCCACGCAAGCCGCTAAAAACTTAG CCAGTACCAAGACATTGATAGCCGATTTGACCGCTGAAAACGCCCGATTGGCGGCCGTACTCGCGCAGGGGCAGGCTCAA GTCGATACAGCAAACGAGCAACTCGCTGCTGGAAAAGCGCAACTGGATCGTAAAAAGACCGATTTAGCACAATTTAAGCA GGTGCTCGGCGCTGCCAGAGTTGATCTCGCCGTTGCACAAGGTGATTTAACGGCTACTAAAGCCTTCTTGGCACGCGTCG AAGCTAACAAATTTACAACGACGACGGCTGCTGCGGCTGATGGAATTGCTGAAACAACAAATGTTGACCAATCGACTGGT GTTACCGCACCACATGCGACAGCTACTAAAACCGTAGCGAATAGTAATGGTACCATTAATGCCACGAGTACTAGCGTAGA TGTTTCAGATGGCGATGTGACAACCAAGCTGGTTGCGGGAGCTAAACAACAGCCAGTTGCCGCACAGGCCACGGCGTTAC CACAAACGGATGAAAAACAGTCAGCGAGTTTGACTGTGGTGGGATTACTAGCGGCAGGGTTCTCATTATTGGGTTTAACA AAGTTACGCAAACGCGCTTAA
Upstream 100 bases:
>100_bases TTTCCAATGTTCAATCAGGACATAAGGGTGTAAACACCATCTAGCATTATGGCATCATTGGTTTATAATGATATTTATAT TAGCTTATTGGAGTGAGCTT
Downstream 100 bases:
>100_bases TTTCTGAGCTCAAAGCTTTTTAGAATTATTGATCATATGAAATAATAAAAACAGTTGGACTAGGATAGCCGATGGATACC GGGAATGATAGATAGGCAAT
Product: cell surface protein precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MNKKLLYTSITTAALFVGTQLGVNNAQADTATDNSDTTNQTSATQGSAQTATNEKLATVKPTSQQQYQANVQTAKGNVAT AQNQVNTTQTKVATAQGQVTNQSQLVAIGQSQYDAGKAQVDRAQQTLDANNQVLAEAENKVDAAKSQTAAAETQIPADQQ QIAANKVAIANQPATEKKAQTAKDAAVTALTQAKTEQATAQSDADAASAVTAAKQATVDQASAAQQKAATQANQAKVAVA SAQDAVNKNTQAINSAKTAIQNTTSQINANNQAVSTAQAKVTAAQAALAAAERPTTTTESQNKYDAAEFPQSQLTGAETV SVAYPSNGKYVPNADKINQYMFEYINQLRALNGQPALKQTSTLQNNAIARAAAQVDGGLDHTGSSYAENLTQVYPQWFMS DQETAYNAVMGWYDESNNVESGSFGHRVNLIYSTGDAGVAINLAKHVAAFEVDNAGMTEAQQDKYVDLFDNAHTNAATGT KALPAVTFNYVQTTPADPKKIAAANATLIAATASLNGLQNTGKTLATTLANQNASLQALQNQTSGLQATVTTKQAQVQVA ATSLKAANVALTQAQGQLATAQQQQLSPVRNLKTSIAKTAAAQVTATQAAKNLASTKTLIADLTAENARLAAVLAQGQAQ VDTANEQLAAGKAQLDRKKTDLAQFKQVLGAARVDLAVAQGDLTATKAFLARVEANKFTTTTAAAADGIAETTNVDQSTG VTAPHATATKTVANSNGTINATSTSVDVSDGDVTTKLVAGAKQQPVAAQATALPQTDEKQSASLTVVGLLAAGFSLLGLT KLRKRA
Sequences:
>Translated_806_residues MNKKLLYTSITTAALFVGTQLGVNNAQADTATDNSDTTNQTSATQGSAQTATNEKLATVKPTSQQQYQANVQTAKGNVAT AQNQVNTTQTKVATAQGQVTNQSQLVAIGQSQYDAGKAQVDRAQQTLDANNQVLAEAENKVDAAKSQTAAAETQIPADQQ QIAANKVAIANQPATEKKAQTAKDAAVTALTQAKTEQATAQSDADAASAVTAAKQATVDQASAAQQKAATQANQAKVAVA SAQDAVNKNTQAINSAKTAIQNTTSQINANNQAVSTAQAKVTAAQAALAAAERPTTTTESQNKYDAAEFPQSQLTGAETV SVAYPSNGKYVPNADKINQYMFEYINQLRALNGQPALKQTSTLQNNAIARAAAQVDGGLDHTGSSYAENLTQVYPQWFMS DQETAYNAVMGWYDESNNVESGSFGHRVNLIYSTGDAGVAINLAKHVAAFEVDNAGMTEAQQDKYVDLFDNAHTNAATGT KALPAVTFNYVQTTPADPKKIAAANATLIAATASLNGLQNTGKTLATTLANQNASLQALQNQTSGLQATVTTKQAQVQVA ATSLKAANVALTQAQGQLATAQQQQLSPVRNLKTSIAKTAAAQVTATQAAKNLASTKTLIADLTAENARLAAVLAQGQAQ VDTANEQLAAGKAQLDRKKTDLAQFKQVLGAARVDLAVAQGDLTATKAFLARVEANKFTTTTAAAADGIAETTNVDQSTG VTAPHATATKTVANSNGTINATSTSVDVSDGDVTTKLVAGAKQQPVAAQATALPQTDEKQSASLTVVGLLAAGFSLLGLT KLRKRA >Mature_806_residues MNKKLLYTSITTAALFVGTQLGVNNAQADTATDNSDTTNQTSATQGSAQTATNEKLATVKPTSQQQYQANVQTAKGNVAT AQNQVNTTQTKVATAQGQVTNQSQLVAIGQSQYDAGKAQVDRAQQTLDANNQVLAEAENKVDAAKSQTAAAETQIPADQQ QIAANKVAIANQPATEKKAQTAKDAAVTALTQAKTEQATAQSDADAASAVTAAKQATVDQASAAQQKAATQANQAKVAVA SAQDAVNKNTQAINSAKTAIQNTTSQINANNQAVSTAQAKVTAAQAALAAAERPTTTTESQNKYDAAEFPQSQLTGAETV SVAYPSNGKYVPNADKINQYMFEYINQLRALNGQPALKQTSTLQNNAIARAAAQVDGGLDHTGSSYAENLTQVYPQWFMS DQETAYNAVMGWYDESNNVESGSFGHRVNLIYSTGDAGVAINLAKHVAAFEVDNAGMTEAQQDKYVDLFDNAHTNAATGT KALPAVTFNYVQTTPADPKKIAAANATLIAATASLNGLQNTGKTLATTLANQNASLQALQNQTSGLQATVTTKQAQVQVA ATSLKAANVALTQAQGQLATAQQQQLSPVRNLKTSIAKTAAAQVTATQAAKNLASTKTLIADLTAENARLAAVLAQGQAQ VDTANEQLAAGKAQLDRKKTDLAQFKQVLGAARVDLAVAQGDLTATKAFLARVEANKFTTTTAAAADGIAETTNVDQSTG VTAPHATATKTVANSNGTINATSTSVDVSDGDVTTKLVAGAKQQPVAAQATALPQTDEKQSASLTVVGLLAAGFSLLGLT KLRKRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83291; Mature: 83291
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLLYTSITTAALFVGTQLGVNNAQADTATDNSDTTNQTSATQGSAQTATNEKLATVK CCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC PTSQQQYQANVQTAKGNVATAQNQVNTTQTKVATAQGQVTNQSQLVAIGQSQYDAGKAQV CCCHHHHHHHCEECCCCEEECCCCCCCHHHEEEECCCCCCCCCEEEEECCCCCCCCHHHH DRAQQTLDANNQVLAEAENKVDAAKSQTAAAETQIPADQQQIAANKVAIANQPATEKKAQ HHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCHHHHH TAKDAAVTALTQAKTEQATAQSDADAASAVTAAKQATVDQASAAQQKAATQANQAKVAVA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE SAQDAVNKNTQAINSAKTAIQNTTSQINANNQAVSTAQAKVTAAQAALAAAERPTTTTES HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QNKYDAAEFPQSQLTGAETVSVAYPSNGKYVPNADKINQYMFEYINQLRALNGQPALKQT CCCCCHHHCCHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH STLQNNAIARAAAQVDGGLDHTGSSYAENLTQVYPQWFMSDQETAYNAVMGWYDESNNVE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCCCCC SGSFGHRVNLIYSTGDAGVAINLAKHVAAFEVDNAGMTEAQQDKYVDLFDNAHTNAATGT CCCCCCEEEEEEECCCCCEEEEHHHHHEEEEECCCCCCCCCCCCCEEHHCCCCCCCCCCC KALPAVTFNYVQTTPADPKKIAAANATLIAATASLNGLQNTGKTLATTLANQNASLQALQ CCCCEEEEEEEECCCCCHHHHHHCCCEEEEEEHHCCCHHHCCHHHHHHHHCCCCHHHHHH NQTSGLQATVTTKQAQVQVAATSLKAANVALTQAQGQLATAQQQQLSPVRNLKTSIAKTA HCCCCCEEEEECCHHEEEEEHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH AAQVTATQAAKNLASTKTLIADLTAENARLAAVLAQGQAQVDTANEQLAAGKAQLDRKKT HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHH DLAQFKQVLGAARVDLAVAQGDLTATKAFLARVEANKFTTTTAAAADGIAETTNVDQSTG HHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCEEEHHHHHHCCCHHHCCCCCCCC VTAPHATATKTVANSNGTINATSTSVDVSDGDVTTKLVAGAKQQPVAAQATALPQTDEKQ CCCCCCCHHHEEECCCCEEEECCCEEECCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCC SASLTVVGLLAAGFSLLGLTKLRKRA CCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKKLLYTSITTAALFVGTQLGVNNAQADTATDNSDTTNQTSATQGSAQTATNEKLATVK CCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC PTSQQQYQANVQTAKGNVATAQNQVNTTQTKVATAQGQVTNQSQLVAIGQSQYDAGKAQV CCCHHHHHHHCEECCCCEEECCCCCCCHHHEEEECCCCCCCCCEEEEECCCCCCCCHHHH DRAQQTLDANNQVLAEAENKVDAAKSQTAAAETQIPADQQQIAANKVAIANQPATEKKAQ HHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCHHHHH TAKDAAVTALTQAKTEQATAQSDADAASAVTAAKQATVDQASAAQQKAATQANQAKVAVA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE SAQDAVNKNTQAINSAKTAIQNTTSQINANNQAVSTAQAKVTAAQAALAAAERPTTTTES HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QNKYDAAEFPQSQLTGAETVSVAYPSNGKYVPNADKINQYMFEYINQLRALNGQPALKQT CCCCCHHHCCHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH STLQNNAIARAAAQVDGGLDHTGSSYAENLTQVYPQWFMSDQETAYNAVMGWYDESNNVE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCCCCC SGSFGHRVNLIYSTGDAGVAINLAKHVAAFEVDNAGMTEAQQDKYVDLFDNAHTNAATGT CCCCCCEEEEEEECCCCCEEEEHHHHHEEEEECCCCCCCCCCCCCEEHHCCCCCCCCCCC KALPAVTFNYVQTTPADPKKIAAANATLIAATASLNGLQNTGKTLATTLANQNASLQALQ CCCCEEEEEEEECCCCCHHHHHHCCCEEEEEEHHCCCHHHCCHHHHHHHHCCCCHHHHHH NQTSGLQATVTTKQAQVQVAATSLKAANVALTQAQGQLATAQQQQLSPVRNLKTSIAKTA HCCCCCEEEEECCHHEEEEEHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH AAQVTATQAAKNLASTKTLIADLTAENARLAAVLAQGQAQVDTANEQLAAGKAQLDRKKT HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHH DLAQFKQVLGAARVDLAVAQGDLTATKAFLARVEANKFTTTTAAAADGIAETTNVDQSTG HHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCEEEHHHHHHCCCHHHCCCCCCCC VTAPHATATKTVANSNGTINATSTSVDVSDGDVTTKLVAGAKQQPVAAQATALPQTDEKQ CCCCCCCHHHEEECCCCEEEECCCEEECCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCC SASLTVVGLLAAGFSLLGLTKLRKRA CCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA