| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is osmC [C]
Identifier: 28377699
GI number: 28377699
Start: 800043
End: 800462
Strand: Direct
Name: osmC [C]
Synonym: lp_0858
Alternate gene names: 28377699
Gene position: 800043-800462 (Clockwise)
Preceding gene: 28377697
Following gene: 28377702
Centisome position: 24.18
GC content: 51.19
Gene sequence:
>420_bases ATGGAGGAACTAAGATTGAGTGATTTTCCAATTTTATATACGACCCAAGCAGTTAATGAAGACGGCATCGAAGGACACGC CTATATTCCCAATGGTCTTGAGGTGGCCGTATCTAGTCCACTTAAGGCGGTGCCGGGCTCGAATCCGGAACAATTAATCG GATTGGCGCTCAGTACATGCCTTAACGCGACGCTGGAGGCAATCGAAAAGGAGCACGGCCAGAGACATCAGAGCAAAGTC GTGACTACGGTGAAGATGTCGCGTGACCGTTTTGGGTACCAATTTTTCCTAGATGCTCGGGTCACGATTCCGGAAGTGGA TGCTGAAACGGCAGCACGGTGGCTCGCGATTGCGGAAACGCGTTGTCCCGTTGCCAAGCTCGTTGGGCCATCAGCTAACG TGACGATTCAATTGGCTTAA
Upstream 100 bases:
>100_bases TATTATTAGAAATATTATACCGCTAATTAGTCGAGAACCAATGCTTCTTACTGACAAGTTTATAATGTTGTGGTAGGTTA ATTGCAAAGTGAACTATCGA
Downstream 100 bases:
>100_bases CCGTTGTGATATGGCCGCAGTAATCATTAATCGTAGTTTGTAAAAATGTCAGGGGATTGATTAAAACGTGGTTCGAGTTG GCAGCGATTAAAACTGCCAA
Product: redox protein, regulator of disulfide bond formation (putative)
Products: NA
Alternate protein names: OsmC/Ohr Family Protein; Disulfide Bond Formation Regulator; Organic Hydroperoxide Resistance Protein; OsmC-Like Protein
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MEELRLSDFPILYTTQAVNEDGIEGHAYIPNGLEVAVSSPLKAVPGSNPEQLIGLALSTCLNATLEAIEKEHGQRHQSKV VTTVKMSRDRFGYQFFLDARVTIPEVDAETAARWLAIAETRCPVAKLVGPSANVTIQLA
Sequences:
>Translated_139_residues MEELRLSDFPILYTTQAVNEDGIEGHAYIPNGLEVAVSSPLKAVPGSNPEQLIGLALSTCLNATLEAIEKEHGQRHQSKV VTTVKMSRDRFGYQFFLDARVTIPEVDAETAARWLAIAETRCPVAKLVGPSANVTIQLA >Mature_139_residues MEELRLSDFPILYTTQAVNEDGIEGHAYIPNGLEVAVSSPLKAVPGSNPEQLIGLALSTCLNATLEAIEKEHGQRHQSKV VTTVKMSRDRFGYQFFLDARVTIPEVDAETAARWLAIAETRCPVAKLVGPSANVTIQLA
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15118; Mature: 15118
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEELRLSDFPILYTTQAVNEDGIEGHAYIPNGLEVAVSSPLKAVPGSNPEQLIGLALSTC CCCCCCCCCCEEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH LNATLEAIEKEHGQRHQSKVVTTVKMSRDRFGYQFFLDARVTIPEVDAETAARWLAIAET HHHHHHHHHHHHCHHHHHHHHHHEEECCCCCCEEEEEECEEECCCCCHHHHHHHHHHHCC RCPVAKLVGPSANVTIQLA CCCHHHHCCCCCCEEEEEC >Mature Secondary Structure MEELRLSDFPILYTTQAVNEDGIEGHAYIPNGLEVAVSSPLKAVPGSNPEQLIGLALSTC CCCCCCCCCCEEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH LNATLEAIEKEHGQRHQSKVVTTVKMSRDRFGYQFFLDARVTIPEVDAETAARWLAIAET HHHHHHHHHHHHCHHHHHHHHHHEEECCCCCCEEEEEECEEECCCCCHHHHHHHHHHHCC RCPVAKLVGPSANVTIQLA CCCHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA