| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is yrhL [H]
Identifier: 28377697
GI number: 28377697
Start: 795335
End: 797317
Strand: Direct
Name: yrhL [H]
Synonym: lp_0856
Alternate gene names: 28377697
Gene position: 795335-797317 (Clockwise)
Preceding gene: 28377696
Following gene: 28377699
Centisome position: 24.04
GC content: 44.68
Gene sequence:
>1983_bases ATGAATGAAAATTTGCGGAGCGTAAATATGAGCCGAACAATGAGTCGGATGAATCGACACCGGATGAATCCAAGACGTTA TATCACCGGATTTGATGGTATCCGGACATTGGCGGTGCTGGGTGTCATCATCTATCACTTGATGCCGGCCTCACTACAAG GAGGTTACTTGGGAGTTCCGATCTTCTTCGTCGTTTCAGGTTATTTGATTACGGATATTTTATTACAAGATATTTTGAGT CGGGGGCATGTCCGGATATGGCGGTTTCTCGGACACCGGATGCGGCGGCTATATCCAGCATTCGTGACGATGTTGTTAGG GACAACAGCCTACATTACGCTGTTTCAACGGTCATTATTGACGAACATTCGGGCTACTGTATTAACGAATTTAGTCTACG TCTATAATTGGTTTGAAATCAATCACGGTCAAAGTTATTTTGACCGTTTCAATGGTGAATCACCGTTCACTCATTTATGG TCGCTCTCAATTGAAGGACAATATTACTTATTCTGGCCATTAGTGATTGGTATCTTGATGGTCATCTTCAAGAAGCGTTC ACGGGTCTTCTGGTTTATGATGATTGCTGCGGGTATTTCAGCGATAACCATGGCAATGTTGTATGATCCAGCGAATACGA ATCGGGTGTACTACGGAACTGATACGCGGATGTTTGCAATCTTGTTAGGTTCTGGCCTTGCGTTTATCTGGCCATCACGG GAATTATCGGCGGACATTGCCAATGTTAATCGAGTGACACTGGATATCTTAGGCGGTGCTTCGCTAATTGCAATTATTTG GATTTTTTTCCAGATGTCCGGTCAATCTGATTTCACTTATCGTGGCGGTATGTTACTATTCACAGTCCTATCAACAGTGT TAGTTGCAACGGTGGCCCACCCGGCTAGTCATCTCAATCGCGTCTTGACGAATCCGTTGTTTAAGTACGTTGGGCAACGT AGTTATGGGATCTATCTCTACCAGTTCCCAGTGATGATTTTCTACGAAACTAAAGTTAAAAACATTGGTGATCATTTACT CCTCAATAGTTTGATTGAAGTTGCCTTAATTTTGATCGTGACGGAATTGAGTTATCGGTTTATTGAAAATCCAATGCGGC ACTATGATTACAGTCGGTTATTGGTCGACTTCAAAGATTTCCTCCGCAAACCGAAGTTTAACCGCGTGACCACTGCGATT GTCGCTTTGACCACGGTCTTATTCGTTATTACGGCGGTTGGTTTCGTTCAACAGCCAAGTAAAGCGGAAGCTAACAAGAA GACTGAATTACAAAAGACGATTGCAGCTAACTCTAAAGCGGCTGATAAGAAGAATGCGGCGGCGCTCAAACGGCAAAAAG CTGCCCAGGCAGCGGCTGCTTCAAGCAAGAAGGTTGCGACTGAAAAGATGCAGACCAAGCAGGCTGAAGCGAAGTTGAAC TCGAAGCAGAAGCAGGTGGAAAAGGAATACGATTTGAAGCCACAAGTTGTTCTAGCGATGGCCAATACGGATCTGACAGC CATTGGGGATTCGGTGTTACTGGATGTTTCTTCCGATCTTCAAGATGTTATCCCGGGTACGGTGGTTCAAGGTCGCGTTG GTCGTCAAGTGACGGAAGTTCCTGGAATCATTAATTCGCTGAAGTCGCAAGGGCAATTAGCCCATAACGTCCTATTGAAC ATTGGGACTAACGGGACAATTACGGATGATCAAGCTGAACAAGTCGTTAAGCTGATTGGTAAGGATCGTCAGATTTTCTG GGTAACGGCCCACGTCCCAACACAGAGTTGGCAAAATCAGGTCAATGCTCAAATTGCCAAGACTGCTAAGAAGCATGCGA ACGTGCATGTTATCGATTGGCATGGTCGTGCGCAGAATCAAAGTGGTTGGTTTGCAGATGACAATGTTCATCCAAATACG ACTGGTAATCGCCAGTTAACGAATTTGATTGCGAACCGCATTGCCGAAGTTAATAACAATTAA
Upstream 100 bases:
>100_bases AATGCTGGTCAATGCGGTCATTTACATATTATAGTAAAGGTACCGAAGCACTGGTGGGTTAGTTAATATTTGTAGAGACA ATTCAAGGGGTAATAGGAAT
Downstream 100 bases:
>100_bases AGATGAGTTCCAGCTTACGTTGATGGTAAGCTGGAACTTTTTTTGGCTAGTTCCGGACAGGTGGTGGTGTCCGACCTGGT CATGATAAGTGGCTGTTTAA
Product: acyltransferase (putative)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MNENLRSVNMSRTMSRMNRHRMNPRRYITGFDGIRTLAVLGVIIYHLMPASLQGGYLGVPIFFVVSGYLITDILLQDILS RGHVRIWRFLGHRMRRLYPAFVTMLLGTTAYITLFQRSLLTNIRATVLTNLVYVYNWFEINHGQSYFDRFNGESPFTHLW SLSIEGQYYLFWPLVIGILMVIFKKRSRVFWFMMIAAGISAITMAMLYDPANTNRVYYGTDTRMFAILLGSGLAFIWPSR ELSADIANVNRVTLDILGGASLIAIIWIFFQMSGQSDFTYRGGMLLFTVLSTVLVATVAHPASHLNRVLTNPLFKYVGQR SYGIYLYQFPVMIFYETKVKNIGDHLLLNSLIEVALILIVTELSYRFIENPMRHYDYSRLLVDFKDFLRKPKFNRVTTAI VALTTVLFVITAVGFVQQPSKAEANKKTELQKTIAANSKAADKKNAAALKRQKAAQAAAASSKKVATEKMQTKQAEAKLN SKQKQVEKEYDLKPQVVLAMANTDLTAIGDSVLLDVSSDLQDVIPGTVVQGRVGRQVTEVPGIINSLKSQGQLAHNVLLN IGTNGTITDDQAEQVVKLIGKDRQIFWVTAHVPTQSWQNQVNAQIAKTAKKHANVHVIDWHGRAQNQSGWFADDNVHPNT TGNRQLTNLIANRIAEVNNN
Sequences:
>Translated_660_residues MNENLRSVNMSRTMSRMNRHRMNPRRYITGFDGIRTLAVLGVIIYHLMPASLQGGYLGVPIFFVVSGYLITDILLQDILS RGHVRIWRFLGHRMRRLYPAFVTMLLGTTAYITLFQRSLLTNIRATVLTNLVYVYNWFEINHGQSYFDRFNGESPFTHLW SLSIEGQYYLFWPLVIGILMVIFKKRSRVFWFMMIAAGISAITMAMLYDPANTNRVYYGTDTRMFAILLGSGLAFIWPSR ELSADIANVNRVTLDILGGASLIAIIWIFFQMSGQSDFTYRGGMLLFTVLSTVLVATVAHPASHLNRVLTNPLFKYVGQR SYGIYLYQFPVMIFYETKVKNIGDHLLLNSLIEVALILIVTELSYRFIENPMRHYDYSRLLVDFKDFLRKPKFNRVTTAI VALTTVLFVITAVGFVQQPSKAEANKKTELQKTIAANSKAADKKNAAALKRQKAAQAAAASSKKVATEKMQTKQAEAKLN SKQKQVEKEYDLKPQVVLAMANTDLTAIGDSVLLDVSSDLQDVIPGTVVQGRVGRQVTEVPGIINSLKSQGQLAHNVLLN IGTNGTITDDQAEQVVKLIGKDRQIFWVTAHVPTQSWQNQVNAQIAKTAKKHANVHVIDWHGRAQNQSGWFADDNVHPNT TGNRQLTNLIANRIAEVNNN >Mature_660_residues MNENLRSVNMSRTMSRMNRHRMNPRRYITGFDGIRTLAVLGVIIYHLMPASLQGGYLGVPIFFVVSGYLITDILLQDILS RGHVRIWRFLGHRMRRLYPAFVTMLLGTTAYITLFQRSLLTNIRATVLTNLVYVYNWFEINHGQSYFDRFNGESPFTHLW SLSIEGQYYLFWPLVIGILMVIFKKRSRVFWFMMIAAGISAITMAMLYDPANTNRVYYGTDTRMFAILLGSGLAFIWPSR ELSADIANVNRVTLDILGGASLIAIIWIFFQMSGQSDFTYRGGMLLFTVLSTVLVATVAHPASHLNRVLTNPLFKYVGQR SYGIYLYQFPVMIFYETKVKNIGDHLLLNSLIEVALILIVTELSYRFIENPMRHYDYSRLLVDFKDFLRKPKFNRVTTAI VALTTVLFVITAVGFVQQPSKAEANKKTELQKTIAANSKAADKKNAAALKRQKAAQAAAASSKKVATEKMQTKQAEAKLN SKQKQVEKEYDLKPQVVLAMANTDLTAIGDSVLLDVSSDLQDVIPGTVVQGRVGRQVTEVPGIINSLKSQGQLAHNVLLN IGTNGTITDDQAEQVVKLIGKDRQIFWVTAHVPTQSWQNQVNAQIAKTAKKHANVHVIDWHGRAQNQSGWFADDNVHPNT TGNRQLTNLIANRIAEVNNN
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI71982248, Length=342, Percent_Identity=26.3157894736842, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17507283, Length=360, Percent_Identity=24.1666666666667, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17560876, Length=368, Percent_Identity=25.5434782608696, Blast_Score=92, Evalue=9e-19, Organism=Caenorhabditis elegans, GI133903927, Length=312, Percent_Identity=26.6025641025641, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI86562056, Length=339, Percent_Identity=25.6637168141593, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17559158, Length=304, Percent_Identity=26.9736842105263, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71984481, Length=223, Percent_Identity=29.5964125560538, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17562856, Length=336, Percent_Identity=26.7857142857143, Blast_Score=86, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17507735, Length=350, Percent_Identity=25.1428571428571, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17542538, Length=241, Percent_Identity=29.4605809128631, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193203179, Length=336, Percent_Identity=25.5952380952381, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562866, Length=311, Percent_Identity=25.4019292604502, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17541014, Length=449, Percent_Identity=23.162583518931, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17541016, Length=460, Percent_Identity=23.2608695652174, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17543924, Length=318, Percent_Identity=26.1006289308176, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17507299, Length=445, Percent_Identity=23.8202247191011, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17507289, Length=445, Percent_Identity=23.8202247191011, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17506687, Length=333, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=7e-14, Organism=Caenorhabditis elegans, GI32567150, Length=161, Percent_Identity=32.9192546583851, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17507167, Length=157, Percent_Identity=29.9363057324841, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17539118, Length=149, Percent_Identity=33.5570469798658, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17509001, Length=311, Percent_Identity=26.0450160771704, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI212640769, Length=341, Percent_Identity=24.9266862170088, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17559544, Length=358, Percent_Identity=24.8603351955307, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71990417, Length=153, Percent_Identity=32.6797385620915, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI212646204, Length=333, Percent_Identity=24.6246246246246, Blast_Score=74, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17541414, Length=174, Percent_Identity=30.4597701149425, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193208811, Length=146, Percent_Identity=32.1917808219178, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193203181, Length=308, Percent_Identity=24.6753246753247, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17507733, Length=326, Percent_Identity=24.8466257668712, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17541412, Length=148, Percent_Identity=31.7567567567568, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562864, Length=321, Percent_Identity=27.1028037383178, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17532481, Length=350, Percent_Identity=23.1428571428571, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17507287, Length=143, Percent_Identity=31.4685314685315, Blast_Score=66, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71983744, Length=328, Percent_Identity=25, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 - InterPro: IPR013830 - InterPro: IPR013831 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 74395; Mature: 74395
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENLRSVNMSRTMSRMNRHRMNPRRYITGFDGIRTLAVLGVIIYHLMPASLQGGYLGVP CCCCHHHHHHHHHHHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH IFFVVSGYLITDILLQDILSRGHVRIWRFLGHRMRRLYPAFVTMLLGTTAYITLFQRSLL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNIRATVLTNLVYVYNWFEINHGQSYFDRFNGESPFTHLWSLSIEGQYYLFWPLVIGILM HHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCCCCEEEEEEEECCCEEEHHHHHHHHHH VIFKKRSRVFWFMMIAAGISAITMAMLYDPANTNRVYYGTDTRMFAILLGSGLAFIWPSR HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCEEEECCH ELSADIANVNRVTLDILGGASLIAIIWIFFQMSGQSDFTYRGGMLLFTVLSTVLVATVAH HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHH PASHLNRVLTNPLFKYVGQRSYGIYLYQFPVMIFYETKVKNIGDHLLLNSLIEVALILIV HHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHH TELSYRFIENPMRHYDYSRLLVDFKDFLRKPKFNRVTTAIVALTTVLFVITAVGFVQQPS HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC KAEANKKTELQKTIAANSKAADKKNAAALKRQKAAQAAAASSKKVATEKMQTKQAEAKLN CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH SKQKQVEKEYDLKPQVVLAMANTDLTAIGDSVLLDVSSDLQDVIPGTVVQGRVGRQVTEV HHHHHHHHHCCCCCEEEEEEECCCHHHCCCHHEEECCHHHHHHCCCCEECCCCCCHHHHH PGIINSLKSQGQLAHNVLLNIGTNGTITDDQAEQVVKLIGKDRQIFWVTAHVPTQSWQNQ HHHHHHHHHCCHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHH VNAQIAKTAKKHANVHVIDWHGRAQNQSGWFADDNVHPNTTGNRQLTNLIANRIAEVNNN HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNENLRSVNMSRTMSRMNRHRMNPRRYITGFDGIRTLAVLGVIIYHLMPASLQGGYLGVP CCCCHHHHHHHHHHHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH IFFVVSGYLITDILLQDILSRGHVRIWRFLGHRMRRLYPAFVTMLLGTTAYITLFQRSLL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNIRATVLTNLVYVYNWFEINHGQSYFDRFNGESPFTHLWSLSIEGQYYLFWPLVIGILM HHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCCCCEEEEEEEECCCEEEHHHHHHHHHH VIFKKRSRVFWFMMIAAGISAITMAMLYDPANTNRVYYGTDTRMFAILLGSGLAFIWPSR HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCEEEECCH ELSADIANVNRVTLDILGGASLIAIIWIFFQMSGQSDFTYRGGMLLFTVLSTVLVATVAH HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHH PASHLNRVLTNPLFKYVGQRSYGIYLYQFPVMIFYETKVKNIGDHLLLNSLIEVALILIV HHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHH TELSYRFIENPMRHYDYSRLLVDFKDFLRKPKFNRVTTAIVALTTVLFVITAVGFVQQPS HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC KAEANKKTELQKTIAANSKAADKKNAAALKRQKAAQAAAASSKKVATEKMQTKQAEAKLN CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH SKQKQVEKEYDLKPQVVLAMANTDLTAIGDSVLLDVSSDLQDVIPGTVVQGRVGRQVTEV HHHHHHHHHCCCCCEEEEEEECCCHHHCCCHHEEECCHHHHHHCCCCEECCCCCCHHHHH PGIINSLKSQGQLAHNVLLNIGTNGTITDDQAEQVVKLIGKDRQIFWVTAHVPTQSWQNQ HHHHHHHHHCCHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHH VNAQIAKTAKKHANVHVIDWHGRAQNQSGWFADDNVHPNTTGNRQLTNLIANRIAEVNNN HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377 [H]