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The map label for this gene is srtA [H]

Identifier: 28377402

GI number: 28377402

Start: 460295

End: 460999

Strand: Direct

Name: srtA [H]

Synonym: lp_0514

Alternate gene names: 28377402

Gene position: 460295-460999 (Clockwise)

Preceding gene: 28377400

Following gene: 28377403

Centisome position: 13.91

GC content: 44.54

Gene sequence:

>705_bases
ATGAAGTCCAAGCAACATCCCGGGTTAAAGTGGTTAGGTCGGGGCGTTTTTGTCCTGCTGGTGCTAGTATCATTGGCATT
AATTTTCAATGAACAGATCAAGAGCTGGTTAGTGAGTTCATACTCGCCGACCGTTACGGCTAAGACGGTTAAGCAGAATA
CGAAGAAGAAGAGCGATTTTAACTTCTCAAAGGTCAAGTCACTTGACTTTCAGACCGTTGCCAAGGCCCGCATGAATAAG
AATGCAATCAACGTGATTGGCTCGATTGCGATTCCGTCCGTTGATTTGTACCTGCCAATCGGTAATGGTGTCAGCAATGA
AACGTTAGCATTGGCGGCTGGCACGATGAAAGCTAATCAGAAGATGGGGCAGGGTAACTACGCGTTGGCTGGTCACCATA
TGATCAAGCATGGTGCACTATTCAGTCCGTTGTACTATAAGAGCAAGGTTGGCCAAATGATTTATGTGAGTGATGCCAAA
AAGATTTATGCGTATAAGACGAGTCAGCGAACATTCATTAAAGCAACTGATGTCCAAGTAATTGATGATGTTCCTGGTCA
GAAGCTGATTACCCTAATTACCTGTGATAAGACCGGGGCGGGTCGCTTAATGATTCGCGGTAAGTACGAACAGCAATGGT
CGTTTAAGTCGGCGCCAACTCAGGTTCAGAAGGCCTTTACAAGTCATTTTAATAACAAATATTAA

Upstream 100 bases:

>100_bases
CGAACTAAACGAATTCGGGGCTTTATTATGCGAACTAATTAAGGTATATTTACCGTAGAACCTTTGATAAAGGGCGTAAA
CAAATTAGGAGGCGGGATTA

Downstream 100 bases:

>100_bases
CAATTATTACATTCTAGGGGTATCGATATCTTCTAACGGAATTTCACGGTACAATATAACTTAAGGTCACATGTCTCAGA
TAAGACATAATTTAGAGGGG

Product: sortase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKSKQHPGLKWLGRGVFVLLVLVSLALIFNEQIKSWLVSSYSPTVTAKTVKQNTKKKSDFNFSKVKSLDFQTVAKARMNK
NAINVIGSIAIPSVDLYLPIGNGVSNETLALAAGTMKANQKMGQGNYALAGHHMIKHGALFSPLYYKSKVGQMIYVSDAK
KIYAYKTSQRTFIKATDVQVIDDVPGQKLITLITCDKTGAGRLMIRGKYEQQWSFKSAPTQVQKAFTSHFNNKY

Sequences:

>Translated_234_residues
MKSKQHPGLKWLGRGVFVLLVLVSLALIFNEQIKSWLVSSYSPTVTAKTVKQNTKKKSDFNFSKVKSLDFQTVAKARMNK
NAINVIGSIAIPSVDLYLPIGNGVSNETLALAAGTMKANQKMGQGNYALAGHHMIKHGALFSPLYYKSKVGQMIYVSDAK
KIYAYKTSQRTFIKATDVQVIDDVPGQKLITLITCDKTGAGRLMIRGKYEQQWSFKSAPTQVQKAFTSHFNNKY
>Mature_234_residues
MKSKQHPGLKWLGRGVFVLLVLVSLALIFNEQIKSWLVSSYSPTVTAKTVKQNTKKKSDFNFSKVKSLDFQTVAKARMNK
NAINVIGSIAIPSVDLYLPIGNGVSNETLALAAGTMKANQKMGQGNYALAGHHMIKHGALFSPLYYKSKVGQMIYVSDAK
KIYAYKTSQRTFIKATDVQVIDDVPGQKLITLITCDKTGAGRLMIRGKYEQQWSFKSAPTQVQKAFTSHFNNKY

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 25975; Mature: 25975

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKQHPGLKWLGRGVFVLLVLVSLALIFNEQIKSWLVSSYSPTVTAKTVKQNTKKKSDF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCC
NFSKVKSLDFQTVAKARMNKNAINVIGSIAIPSVDLYLPIGNGVSNETLALAAGTMKANQ
CHHHHHCCCHHHHHHHHHCCCHHHHEEEEECCCEEEEEECCCCCCCCEEEEEECCHHHHH
KMGQGNYALAGHHMIKHGALFSPLYYKSKVGQMIYVSDAKKIYAYKTSQRTFIKATDVQV
HCCCCCEEEECCHHHHCCCCCCCHHHHHHCCCEEEEECCCEEEEEECCCCEEEEECCEEE
IDDVPGQKLITLITCDKTGAGRLMIRGKYEQQWSFKSAPTQVQKAFTSHFNNKY
ECCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKSKQHPGLKWLGRGVFVLLVLVSLALIFNEQIKSWLVSSYSPTVTAKTVKQNTKKKSDF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCC
NFSKVKSLDFQTVAKARMNKNAINVIGSIAIPSVDLYLPIGNGVSNETLALAAGTMKANQ
CHHHHHCCCHHHHHHHHHCCCHHHHEEEEECCCEEEEEECCCCCCCCEEEEEECCHHHHH
KMGQGNYALAGHHMIKHGALFSPLYYKSKVGQMIYVSDAKKIYAYKTSQRTFIKATDVQV
HCCCCCEEEECCHHHHCCCCCCCHHHHHHCCCEEEEECCCEEEEEECCCCEEEEECCEEE
IDDVPGQKLITLITCDKTGAGRLMIRGKYEQQWSFKSAPTQVQKAFTSHFNNKY
ECCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]