Click here to switch to the map view.

The map label for this gene is plnV

Identifier: 28377331

GI number: 28377331

Start: 381580

End: 382260

Strand: Direct

Name: plnV

Synonym: lp_0428

Alternate gene names: NA

Gene position: 381580-382260 (Clockwise)

Preceding gene: 28377330

Following gene: 28377332

Centisome position: 11.53

GC content: 43.76

Gene sequence:

>681_bases
ATGGTACATCAAAACGTCAAATTTATTAGTAGATTACTACTTGCCAGTTTATTGGCAGCAATCGTGATGGGTCTTAGTAC
GGCGCCCATCGATATTTTAACACTCAAGTATAACTGGATAACGGTGGCGATCTTCTTGGTCGTCTACCTGTTTGCAATTT
ATTTATTCTATCGAATTTATCTGGAATCAGTTACTAATAATCATTTTAAGATTACGAAAATAGCTGCTAAGCCGAGCGCG
CGTCAATTAGTGATTACGGTACTGGCAATGGTGGTCATGCTGATTTTGGCAGCGGTGCAAGTTAAATTTGTTAGTGATGC
TGTCTATTCAATCGCGGAGAATGTTGCTGACTTGCAAGCATTGTCTCAGCGCTCACCGATATTGATGGCGTTGGCCCTGG
GTGTTTTTGCACCGATTTGTGAGGAATTAATTATTCGCGGCAATTTCTTCAGTTATGCGCTGGCGGAACGTTTTGATCAG
CCACGATACCAACTAGTTACCGTTATTGTTAACGGCGTGTTGTTTGGTCTACTGCGTGGCGGTTTTAGTTGGGTGCAGTT
GTCATACTATACGGTTATGGGTCTCGTACTCGCGGCAACCTACATATTATCTGGCCGGGATATTCGAGTCAACAGTGTCG
TGCACGTCACAGCTAATCTGGGCCTCATGCTAATGGCATGA

Upstream 100 bases:

>100_bases
TGATGTGGGGATAAGTTTTAGTTAGTGATATCCGGTCAAACCGCAAGTTGTGGATTAGGTACCATTGGGGATAATTATCA
AGAAATGAATGTGAAGGAGC

Downstream 100 bases:

>100_bases
GGCCAGATGGACTTGGCAAGTAACTTGAGTGGGTTGATTTAAAAGCCCGTTAGTGAACATTCTAGTTACGATTGTTTGGA
TGGAGTGGATGAAATGTTAC

Product: integral membrane protein plnV

Products: NA

Alternate protein names: Integral Membrane Protein PlnV; Integral Membrane Protein PlnW; Metal-Dependent Membrane Protease

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MVHQNVKFISRLLLASLLAAIVMGLSTAPIDILTLKYNWITVAIFLVVYLFAIYLFYRIYLESVTNNHFKITKIAAKPSA
RQLVITVLAMVVMLILAAVQVKFVSDAVYSIAENVADLQALSQRSPILMALALGVFAPICEELIIRGNFFSYALAERFDQ
PRYQLVTVIVNGVLFGLLRGGFSWVQLSYYTVMGLVLAATYILSGRDIRVNSVVHVTANLGLMLMA

Sequences:

>Translated_226_residues
MVHQNVKFISRLLLASLLAAIVMGLSTAPIDILTLKYNWITVAIFLVVYLFAIYLFYRIYLESVTNNHFKITKIAAKPSA
RQLVITVLAMVVMLILAAVQVKFVSDAVYSIAENVADLQALSQRSPILMALALGVFAPICEELIIRGNFFSYALAERFDQ
PRYQLVTVIVNGVLFGLLRGGFSWVQLSYYTVMGLVLAATYILSGRDIRVNSVVHVTANLGLMLMA
>Mature_226_residues
MVHQNVKFISRLLLASLLAAIVMGLSTAPIDILTLKYNWITVAIFLVVYLFAIYLFYRIYLESVTNNHFKITKIAAKPSA
RQLVITVLAMVVMLILAAVQVKFVSDAVYSIAENVADLQALSQRSPILMALALGVFAPICEELIIRGNFFSYALAERFDQ
PRYQLVTVIVNGVLFGLLRGGFSWVQLSYYTVMGLVLAATYILSGRDIRVNSVVHVTANLGLMLMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25069; Mature: 25069

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHQNVKFISRLLLASLLAAIVMGLSTAPIDILTLKYNWITVAIFLVVYLFAIYLFYRIY
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
LESVTNNHFKITKIAAKPSARQLVITVLAMVVMLILAAVQVKFVSDAVYSIAENVADLQA
HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQRSPILMALALGVFAPICEELIIRGNFFSYALAERFDQPRYQLVTVIVNGVLFGLLRG
HHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
GFSWVQLSYYTVMGLVLAATYILSGRDIRVNSVVHVTANLGLMLMA
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEECCCEEEEC
>Mature Secondary Structure
MVHQNVKFISRLLLASLLAAIVMGLSTAPIDILTLKYNWITVAIFLVVYLFAIYLFYRIY
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
LESVTNNHFKITKIAAKPSARQLVITVLAMVVMLILAAVQVKFVSDAVYSIAENVADLQA
HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQRSPILMALALGVFAPICEELIIRGNFFSYALAERFDQPRYQLVTVIVNGVLFGLLRG
HHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
GFSWVQLSYYTVMGLVLAATYILSGRDIRVNSVVHVTANLGLMLMA
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA