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The map label for this gene is plnU

Identifier: 28377330

GI number: 28377330

Start: 380825

End: 381493

Strand: Direct

Name: plnU

Synonym: lp_0426

Alternate gene names: NA

Gene position: 380825-381493 (Clockwise)

Preceding gene: 28377329

Following gene: 28377331

Centisome position: 11.51

GC content: 44.54

Gene sequence:

>669_bases
ATGGTTGCTCGATTGATCAGGGTATTTGGTTATGTGTTAGCGGGTTTAGGGCTATTTATATTCATTCAATTACCGGTGTT
AGCGGATGGCTATTGGAATTGGTGGGGTGAACGCCCGCAACAAATCAACATCGGTTATCATTGGGTAGCATTAGTCGTTT
TAACCGTTGGTGTTGCGGTCGTACTAGTACGTTGCTATCACCATTATTTTGAGATGCCAGTCCTGTTAGGGCCTTTTTCT
TGGTCAATGATGGGGCTGACTGCTTTAGTGGCAGTGGTGGTCGTGGTGATTCAAATGGGGATAAGTGGTCTGCTAGTCAG
TCCAACTGAAACACAAAATGATGAAATCATGGCACTGATCCACAGTCCATTGGGGTTATTAACATTAGTGTGCACAAACA
TCGTTAGCCCCGTACTCGAAGAATTACTTTTCCGTGGAATTGTTCAAAATACGCTGCGACGATACTTGCCAGTATTGGGC
GCGATTATACTGACAAACGCAGTATTCGCACTCGGCCATGGTTATCAGTTAGCCAGTACGGTGGGCATCTTCATTACAGG
GTGCGGTTTTTCATGGTTAGTACTCAAAACAAAACAACTGAGTACCGCAATGGGATGTCATATACTGGTGAACTGGCTGG
TCACACTTATTAACATGATGTGGGGATAA

Upstream 100 bases:

>100_bases
TTTGGCAGTTTTCGCGTTGGCGGCTATGAGTTAACGTTGTGGATAAAAATTAAAACATAAGAATTAGTTTATCCACAGGG
GATAACTTGGGAGGCTTGGT

Downstream 100 bases:

>100_bases
GTTTTAGTTAGTGATATCCGGTCAAACCGCAAGTTGTGGATTAGGTACCATTGGGGATAATTATCAAGAAATGAATGTGA
AGGAGCATGGTACATCAAAA

Product: integral membrane protein PlnU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MVARLIRVFGYVLAGLGLFIFIQLPVLADGYWNWWGERPQQINIGYHWVALVVLTVGVAVVLVRCYHHYFEMPVLLGPFS
WSMMGLTALVAVVVVVIQMGISGLLVSPTETQNDEIMALIHSPLGLLTLVCTNIVSPVLEELLFRGIVQNTLRRYLPVLG
AIILTNAVFALGHGYQLASTVGIFITGCGFSWLVLKTKQLSTAMGCHILVNWLVTLINMMWG

Sequences:

>Translated_222_residues
MVARLIRVFGYVLAGLGLFIFIQLPVLADGYWNWWGERPQQINIGYHWVALVVLTVGVAVVLVRCYHHYFEMPVLLGPFS
WSMMGLTALVAVVVVVIQMGISGLLVSPTETQNDEIMALIHSPLGLLTLVCTNIVSPVLEELLFRGIVQNTLRRYLPVLG
AIILTNAVFALGHGYQLASTVGIFITGCGFSWLVLKTKQLSTAMGCHILVNWLVTLINMMWG
>Mature_222_residues
MVARLIRVFGYVLAGLGLFIFIQLPVLADGYWNWWGERPQQINIGYHWVALVVLTVGVAVVLVRCYHHYFEMPVLLGPFS
WSMMGLTALVAVVVVVIQMGISGLLVSPTETQNDEIMALIHSPLGLLTLVCTNIVSPVLEELLFRGIVQNTLRRYLPVLG
AIILTNAVFALGHGYQLASTVGIFITGCGFSWLVLKTKQLSTAMGCHILVNWLVTLINMMWG

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24539; Mature: 24539

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARLIRVFGYVLAGLGLFIFIQLPVLADGYWNWWGERPQQINIGYHWVALVVLTVGVAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEECHHHHHHHHHHHHHHHH
VLVRCYHHYFEMPVLLGPFSWSMMGLTALVAVVVVVIQMGISGLLVSPTETQNDEIMALI
HHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHH
HSPLGLLTLVCTNIVSPVLEELLFRGIVQNTLRRYLPVLGAIILTNAVFALGHGYQLAST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VGIFITGCGFSWLVLKTKQLSTAMGCHILVNWLVTLINMMWG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVARLIRVFGYVLAGLGLFIFIQLPVLADGYWNWWGERPQQINIGYHWVALVVLTVGVAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEECHHHHHHHHHHHHHHHH
VLVRCYHHYFEMPVLLGPFSWSMMGLTALVAVVVVVIQMGISGLLVSPTETQNDEIMALI
HHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHH
HSPLGLLTLVCTNIVSPVLEELLFRGIVQNTLRRYLPVLGAIILTNAVFALGHGYQLAST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VGIFITGCGFSWLVLKTKQLSTAMGCHILVNWLVTLINMMWG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA