| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377297
Identifier: 28377297
GI number: 28377297
Start: 353355
End: 353630
Strand: Direct
Name: 28377297
Synonym: lp_0384
Alternate gene names: NA
Gene position: 353355-353630 (Clockwise)
Preceding gene: 28377296
Following gene: 28377298
Centisome position: 10.68
GC content: 40.58
Gene sequence:
>276_bases TTGACGAATCTAGTTAGGTATAATGATATTTATACCATGATTACGGGGAAAGTTGCCGTTACCGGTAAGAAGTGTTTATG CTTAGCAGGTGTGGCTTGGACATCCCTGAACTCTGTGCCTGTCTCAGGAAAGCAAAGAAGTGAGGTAGAATATATGGATG TTGATGAGAATTGGTGGCATGAGAGCGTACTAAAAGAGTTCCATAAAGGTGGTAAGCCTAATCCAGATTTTAATCCTAAA GCTTCTAAGAATACCCATATCCCTGTCGGTAAATAG
Upstream 100 bases:
>100_bases CAAACAAAATAGGTCGGCTGAAGATCCAGAATGTTGATGAAATTACGCGTGCTGGACTTTTTAGACTATTGCAGGTATTA ATAAAGGCATTATTTCGTTT
Downstream 100 bases:
>100_bases AGAAAGAGTAGAGAAATATGAATATAGAAGAAATCAACTCAGAAATATTAAAGGTTAACAATTATTTAAAAAAATGTTTA TGGATGGATTTTGAATTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTNLVRYNDIYTMITGKVAVTGKKCLCLAGVAWTSLNSVPVSGKQRSEVEYMDVDENWWHESVLKEFHKGGKPNPDFNPK ASKNTHIPVGK
Sequences:
>Translated_91_residues MTNLVRYNDIYTMITGKVAVTGKKCLCLAGVAWTSLNSVPVSGKQRSEVEYMDVDENWWHESVLKEFHKGGKPNPDFNPK ASKNTHIPVGK >Mature_90_residues TNLVRYNDIYTMITGKVAVTGKKCLCLAGVAWTSLNSVPVSGKQRSEVEYMDVDENWWHESVLKEFHKGGKPNPDFNPKA SKNTHIPVGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10194; Mature: 10063
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLVRYNDIYTMITGKVAVTGKKCLCLAGVAWTSLNSVPVSGKQRSEVEYMDVDENWWH CCCCEEECCEEEEEECEEEECCCCEEEEECCHHCCCCCCCCCCCCCCCEEEEECCCCCHH ESVLKEFHKGGKPNPDFNPKASKNTHIPVGK HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TNLVRYNDIYTMITGKVAVTGKKCLCLAGVAWTSLNSVPVSGKQRSEVEYMDVDENWWH CCCEEECCEEEEEECEEEECCCCEEEEECCHHCCCCCCCCCCCCCCCEEEEECCCCCHH ESVLKEFHKGGKPNPDFNPKASKNTHIPVGK HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA