Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377280

Identifier: 28377280

GI number: 28377280

Start: 331776

End: 333656

Strand: Direct

Name: 28377280

Synonym: lp_0365

Alternate gene names: NA

Gene position: 331776-333656 (Clockwise)

Preceding gene: 28377279

Following gene: 28377282

Centisome position: 10.03

GC content: 38.44

Gene sequence:

>1881_bases
GTGGTGATTGTAGGAGGTTTGGTAAGCATCTTAACTGTTGGAATCAGTTACTGTTGTTACCTCGTCAAACACGCAGGCGT
TACTAATTTGTTGACAATCATACTGTCCCTCGGTTGTGTAATGGCAACGTTAGGGTTAACCATAATGATGCCTGGTTTGC
CGGAAAAAATTGGTGTTATTGGCGTCGTTATTTTGGCTGCAACGATGAATTATTTAATGTTCTGGCACGAAAAACGGACT
GCTCGAGAAGATGATACTCAATTTGACTGGATTGATAGTGGCAACCAACACATGGGTTTTCAACATATTATTCAAAATCA
TGGTGAAGCATTTGCAGCCCAAGGAGTTTCACAAACTGCTATTCCTAAACTGGTTGCGAAAGCTGTTAATAGCTATCATC
GATCTGGGGGGCACTTTGACAAGTGGCAACCATATCATCGTGTACTATTGACTATTCACTATCGGTATCGAAAGCACCTT
TTAGCAGTGACGTTGTCGCGAGACCAGTACATTATTAGTGCTTATCCGGCGCCGTTGTTGGATAAATATCCACGGGTGAA
GAAAATTCGAATTATGTTGGAATATGGTTGTTATCCGATTTGGTTGTATGATGAGAAGGGTAACCTAATTAGTAATGATT
TGCCGCAAGTATTGCGAAAGGACGCAACGCTTAATAAAAAACTATTGGTGTTGCAAAAGCAATACGATAGTTTGTTTACT
AATAATCAGCATGATTTTAGCTACAATGGTTTTGCAACTGCGGCAGATGAACAGCAGTTTTTACGTGCATTCATGGTTAT
TCACAAGGATTTGAAGCGGCGACTAGGGGGGAAGTACGCGGTCTTAAACAAAATTACGGGGAAAGTAGACAAGGTATTTC
CAACAGCAACGACGGTAGCATCGTCGCAAGCTATACCGAGTGAGGCTGAATTAAACAGTGCTATCGTTAATAAACCTAAA
CCTGTAGTGGATAAAAAAGCAAAGACTCATGTGCGGACGTATCCAGGATTAAAAGCTGATCTGTTGAAGGTTTATCAGAA
TTTTGATATAGAAAATTTAGGCCCTACGTATGACGCTTTAGTCGATATAACTAAGCTTTATCGTAGAAGATTTACAAAAT
ATACCGGTCAAGTTACGTTGAAAACAGTTCAACAATCTACTGCGAAAGATTATATTCTTGGTCATACGGACAAGAACTTA
TCTGAGATTGTTGCTAATAATAAAGATATGGTGGCGAAAAATATTGGTAATGCGGCAATGTGTCGGCAAGTAATGCAATT
GATAGATATTATGAGTCGGTATACATTGGACGAACTATGTTTTAAATGTAATCTGGCTCGACTTCAATTGAGTACGACTA
ATGCCCATAAGCGATTATTGAAAACATGCCCTGATTGTGGTGCTGTCTTTGTAAATAATAAGTTAACCAATATTACGATA
ACTGGTTTACCTGCCAATAAATTACAAGTTAAGATGTATTTAAGGAAAACAGGCGTTGTATCGATGGCCGCAGCAACTGA
GTCAATAGACACTACTATGCCAAAACGTAAAATAAGACTATTTATGGAATGGGGTTCTTCCTTTATTTGGGTATATAACG
AGGATAATGAATTGATTAAAAATGGACTCCCGGATGAGCTATATCCTGATTCAGGACTAGTGGCGAAGGTAAACGTTTTA
AATCGTCAGTATAGCGAGCTGTTTACCAATAATGGTTATGAATTTAGATATAATGGATTTAAAACGCATGAAGATGAGAA
TGCATTCGAACGTGACTTTAATGCGATTTATGAAGAAATCGCTGAAAGAACTAGAGGGAAGTATCGAGTTATCAATGAAT
ATTATTTCACATCTAATACTGAAGATGTGCGGGACCTGTAG

Upstream 100 bases:

>100_bases
AAATTATAAATAGAAGTAAAAAAGTGCCGTGTTTTCATGGTAGCAGTAAAGTGCGGTTTGTTGATCTATAAGGTTTGATG
ATATTGAAAGGGGATAGATA

Downstream 100 bases:

>100_bases
TTGTTGGTCAATCATTGTGGATGAATTCAATTGGAAATAAGCTATATGTAGAATTTGTTGCGAGATTGTAACAGTAGTTA
TGAAGAAATTAATTCAACTA

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MVIVGGLVSILTVGISYCCYLVKHAGVTNLLTIILSLGCVMATLGLTIMMPGLPEKIGVIGVVILAATMNYLMFWHEKRT
AREDDTQFDWIDSGNQHMGFQHIIQNHGEAFAAQGVSQTAIPKLVAKAVNSYHRSGGHFDKWQPYHRVLLTIHYRYRKHL
LAVTLSRDQYIISAYPAPLLDKYPRVKKIRIMLEYGCYPIWLYDEKGNLISNDLPQVLRKDATLNKKLLVLQKQYDSLFT
NNQHDFSYNGFATAADEQQFLRAFMVIHKDLKRRLGGKYAVLNKITGKVDKVFPTATTVASSQAIPSEAELNSAIVNKPK
PVVDKKAKTHVRTYPGLKADLLKVYQNFDIENLGPTYDALVDITKLYRRRFTKYTGQVTLKTVQQSTAKDYILGHTDKNL
SEIVANNKDMVAKNIGNAAMCRQVMQLIDIMSRYTLDELCFKCNLARLQLSTTNAHKRLLKTCPDCGAVFVNNKLTNITI
TGLPANKLQVKMYLRKTGVVSMAAATESIDTTMPKRKIRLFMEWGSSFIWVYNEDNELIKNGLPDELYPDSGLVAKVNVL
NRQYSELFTNNGYEFRYNGFKTHEDENAFERDFNAIYEEIAERTRGKYRVINEYYFTSNTEDVRDL

Sequences:

>Translated_626_residues
MVIVGGLVSILTVGISYCCYLVKHAGVTNLLTIILSLGCVMATLGLTIMMPGLPEKIGVIGVVILAATMNYLMFWHEKRT
AREDDTQFDWIDSGNQHMGFQHIIQNHGEAFAAQGVSQTAIPKLVAKAVNSYHRSGGHFDKWQPYHRVLLTIHYRYRKHL
LAVTLSRDQYIISAYPAPLLDKYPRVKKIRIMLEYGCYPIWLYDEKGNLISNDLPQVLRKDATLNKKLLVLQKQYDSLFT
NNQHDFSYNGFATAADEQQFLRAFMVIHKDLKRRLGGKYAVLNKITGKVDKVFPTATTVASSQAIPSEAELNSAIVNKPK
PVVDKKAKTHVRTYPGLKADLLKVYQNFDIENLGPTYDALVDITKLYRRRFTKYTGQVTLKTVQQSTAKDYILGHTDKNL
SEIVANNKDMVAKNIGNAAMCRQVMQLIDIMSRYTLDELCFKCNLARLQLSTTNAHKRLLKTCPDCGAVFVNNKLTNITI
TGLPANKLQVKMYLRKTGVVSMAAATESIDTTMPKRKIRLFMEWGSSFIWVYNEDNELIKNGLPDELYPDSGLVAKVNVL
NRQYSELFTNNGYEFRYNGFKTHEDENAFERDFNAIYEEIAERTRGKYRVINEYYFTSNTEDVRDL
>Mature_626_residues
MVIVGGLVSILTVGISYCCYLVKHAGVTNLLTIILSLGCVMATLGLTIMMPGLPEKIGVIGVVILAATMNYLMFWHEKRT
AREDDTQFDWIDSGNQHMGFQHIIQNHGEAFAAQGVSQTAIPKLVAKAVNSYHRSGGHFDKWQPYHRVLLTIHYRYRKHL
LAVTLSRDQYIISAYPAPLLDKYPRVKKIRIMLEYGCYPIWLYDEKGNLISNDLPQVLRKDATLNKKLLVLQKQYDSLFT
NNQHDFSYNGFATAADEQQFLRAFMVIHKDLKRRLGGKYAVLNKITGKVDKVFPTATTVASSQAIPSEAELNSAIVNKPK
PVVDKKAKTHVRTYPGLKADLLKVYQNFDIENLGPTYDALVDITKLYRRRFTKYTGQVTLKTVQQSTAKDYILGHTDKNL
SEIVANNKDMVAKNIGNAAMCRQVMQLIDIMSRYTLDELCFKCNLARLQLSTTNAHKRLLKTCPDCGAVFVNNKLTNITI
TGLPANKLQVKMYLRKTGVVSMAAATESIDTTMPKRKIRLFMEWGSSFIWVYNEDNELIKNGLPDELYPDSGLVAKVNVL
NRQYSELFTNNGYEFRYNGFKTHEDENAFERDFNAIYEEIAERTRGKYRVINEYYFTSNTEDVRDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71273; Mature: 71273

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIVGGLVSILTVGISYCCYLVKHAGVTNLLTIILSLGCVMATLGLTIMMPGLPEKIGVI
CEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHH
GVVILAATMNYLMFWHEKRTAREDDTQFDWIDSGNQHMGFQHIIQNHGEAFAAQGVSQTA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCHHH
IPKLVAKAVNSYHRSGGHFDKWQPYHRVLLTIHYRYRKHLLAVTLSRDQYIISAYPAPLL
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCEEEEECCCHHH
DKYPRVKKIRIMLEYGCYPIWLYDEKGNLISNDLPQVLRKDATLNKKLLVLQKQYDSLFT
HCCCCHHHEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
NNQHDFSYNGFATAADEQQFLRAFMVIHKDLKRRLGGKYAVLNKITGKVDKVFPTATTVA
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCHHHHHCCCHHHHH
SSQAIPSEAELNSAIVNKPKPVVDKKAKTHVRTYPGLKADLLKVYQNFDIENLGPTYDAL
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHH
VDITKLYRRRFTKYTGQVTLKTVQQSTAKDYILGHTDKNLSEIVANNKDMVAKNIGNAAM
HHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCEECCCCCCHHHHHCCCCHHHHHHCCCHHH
CRQVMQLIDIMSRYTLDELCFKCNLARLQLSTTNAHKRLLKTCPDCGAVFVNNKLTNITI
HHHHHHHHHHHHHHCHHHHHHHCCHHEEEEECCHHHHHHHHHCCCCCEEEECCCEEEEEE
TGLPANKLQVKMYLRKTGVVSMAAATESIDTTMPKRKIRLFMEWGSSFIWVYNEDNELIK
ECCCCCCEEEEEEEHHCCCEEEHHHHHHHHHCCCHHHHHHHEECCCCEEEEECCCHHHHH
NGLPDELYPDSGLVAKVNVLNRQYSELFTNNGYEFRYNGFKTHEDENAFERDFNAIYEEI
CCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
AERTRGKYRVINEYYFTSNTEDVRDL
HHHCCCCEEEEEEEEECCCCHHHHCC
>Mature Secondary Structure
MVIVGGLVSILTVGISYCCYLVKHAGVTNLLTIILSLGCVMATLGLTIMMPGLPEKIGVI
CEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHH
GVVILAATMNYLMFWHEKRTAREDDTQFDWIDSGNQHMGFQHIIQNHGEAFAAQGVSQTA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCHHH
IPKLVAKAVNSYHRSGGHFDKWQPYHRVLLTIHYRYRKHLLAVTLSRDQYIISAYPAPLL
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCEEEEECCCHHH
DKYPRVKKIRIMLEYGCYPIWLYDEKGNLISNDLPQVLRKDATLNKKLLVLQKQYDSLFT
HCCCCHHHEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
NNQHDFSYNGFATAADEQQFLRAFMVIHKDLKRRLGGKYAVLNKITGKVDKVFPTATTVA
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCHHHHHCCCHHHHH
SSQAIPSEAELNSAIVNKPKPVVDKKAKTHVRTYPGLKADLLKVYQNFDIENLGPTYDAL
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHH
VDITKLYRRRFTKYTGQVTLKTVQQSTAKDYILGHTDKNLSEIVANNKDMVAKNIGNAAM
HHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCEECCCCCCHHHHHCCCCHHHHHHCCCHHH
CRQVMQLIDIMSRYTLDELCFKCNLARLQLSTTNAHKRLLKTCPDCGAVFVNNKLTNITI
HHHHHHHHHHHHHHCHHHHHHHCCHHEEEEECCHHHHHHHHHCCCCCEEEECCCEEEEEE
TGLPANKLQVKMYLRKTGVVSMAAATESIDTTMPKRKIRLFMEWGSSFIWVYNEDNELIK
ECCCCCCEEEEEEEHHCCCEEEHHHHHHHHHCCCHHHHHHHEECCCCEEEEECCCHHHHH
NGLPDELYPDSGLVAKVNVLNRQYSELFTNNGYEFRYNGFKTHEDENAFERDFNAIYEEI
CCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
AERTRGKYRVINEYYFTSNTEDVRDL
HHHCCCCEEEEEEEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA