Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

Click here to switch to the map view.

The map label for this gene is 28377268

Identifier: 28377268

GI number: 28377268

Start: 321422

End: 321691

Strand: Direct

Name: 28377268

Synonym: lp_0351

Alternate gene names: NA

Gene position: 321422-321691 (Clockwise)

Preceding gene: 28377267

Following gene: 28377270

Centisome position: 9.72

GC content: 49.26

Gene sequence:

>270_bases
ATGCGCCGACAATTAACAAACCGGCAACGGTGGTTCGTGATTGTGATCGCGACGATTTTGGGAGTAGGCTGTGCCTTGCT
TGGTCAATGGGGCCAGTTCTTCGGAGTCATCGCAGCAACGTTTGCGCTAATGTTGTTAACCAGTGGCTGTTTGACTTTTT
GTCATCGCCGCGGGTGGCAACCTGGAAGCGGCATGTTGCTAGCATTAGTCACGGCTACAGGGTATGTACTAGTTATTTTA
GGAAGCTATGGTTATTTACTGCACAGCTAA

Upstream 100 bases:

>100_bases
AGTGACGGTTGTTAATTGTCTTGTTTGGCAAACTTCTACCAAAATGTTAAAATTTTACTAAGCAGAACGTTGACTGCATT
AACTATATGGTGGGATGAAT

Downstream 100 bases:

>100_bases
GCGCAGCACTTTGATACGAGGAATCGACCGTATCAAAGTGCTTTTTGTCTGCAATCATTTTTAGCGTGCTAATTTAAGTT
ATGTTTCAACGATGATTACG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MRRQLTNRQRWFVIVIATILGVGCALLGQWGQFFGVIAATFALMLLTSGCLTFCHRRGWQPGSGMLLALVTATGYVLVIL
GSYGYLLHS

Sequences:

>Translated_89_residues
MRRQLTNRQRWFVIVIATILGVGCALLGQWGQFFGVIAATFALMLLTSGCLTFCHRRGWQPGSGMLLALVTATGYVLVIL
GSYGYLLHS
>Mature_89_residues
MRRQLTNRQRWFVIVIATILGVGCALLGQWGQFFGVIAATFALMLLTSGCLTFCHRRGWQPGSGMLLALVTATGYVLVIL
GSYGYLLHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9764; Mature: 9764

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQLTNRQRWFVIVIATILGVGCALLGQWGQFFGVIAATFALMLLTSGCLTFCHRRGWQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGSGMLLALVTATGYVLVILGSYGYLLHS
CCCCHHHHHHHHHHHHEEHCCCCCHHHCC
>Mature Secondary Structure
MRRQLTNRQRWFVIVIATILGVGCALLGQWGQFFGVIAATFALMLLTSGCLTFCHRRGWQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGSGMLLALVTATGYVLVILGSYGYLLHS
CCCCHHHHHHHHHHHHEEHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA