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The map label for this gene is yclI [H]

Identifier: 28377221

GI number: 28377221

Start: 274259

End: 275737

Strand: Direct

Name: yclI [H]

Synonym: lp_0298

Alternate gene names: 28377221

Gene position: 274259-275737 (Clockwise)

Preceding gene: 28377220

Following gene: 28377222

Centisome position: 8.29

GC content: 45.84

Gene sequence:

>1479_bases
GTGAATTTTTTTAAACGCGCATGGCTCAATCTAACGGCAAAAAAAGGCCGTTCAATTCTATTAGTACTTGTTACATCAGC
AATCATGCTGTTTGTATTGGCCGGGTTATTGATTAGAAATGCTGCCGATACGGCAACTAGTAATGCCAAGAAAAGTGTCG
GGGCTACCGTCACTTTATCTGCTAACCGGGAGGCGGCTTTTAAGAAGATGCGCAGCGCCACGTCGACGAGTAAAAGTAGT
CGGCCTAAGTTGACGACATCGCCCGTTAAACTGAGTGATGCGAAGAAAATCGCCAAGCTTAGCAACGTTTCAAGTTACAA
TGCGACCGTCTCAACTTCCGCTAATGCGAAGGGCTTTGATACGATTTCAACATCAGGTAGTAGTACCGGTGGTGGGATGA
AAGGTATGGGTGGCTCAAGTAGCAGTGGTACTGGTGATATCTCGATTACTGGGGTCACTAATACGAACAGCGTCTCAACC
TTTGAAAGTAGCTCAAGTAAAATTACGAAGGGCCGCGGTATTACAGCTAGTGATGAAGGCACTAACAACGTTGTCATCGA
AAGTGAATTGGCTAAGGAAGATAGCCTGAGCGTCGGTGATACGATTAAGTTAAAAGCAACGACCGGTGATAAGAAGACTT
ACACGATGAAGATCGTTGGGATCTATAAAGCGTCATCTAGTGCAAGTACGCAACAAGGTCCTGGTAGTACCGATGTCAGC
AACAGTGTTTACACGTCATACACGTTCGCTAACACGGTCAAGGGTTCTAAGTACAAGAACACAGCTGATTCTGTGACTTT
TGCAATCTCAGACCCCGCTAAAGTTAGCAGCGTCAAAACGTCTGGTAAACAGTTGATCAATACGTCGAAGTATTCGTTGT
CAACGGATGATAGCAGTTACCAAACGGTTAAGAGTTCGATGAATAACGTTAAATCATTTGCGGATAAGATTGTCTGGCTC
GTTGCGATTGCTGGAACGATTATCTTAGCTTTAATCGTTATCTTGATGATTCGTGAACGCCGCTATGAAATTGGTGTCTT
GTTATCATTAGGTGAGAGCCGTTGGAAGATTGTCGCTCAATTCTTTGCTGAAATGGTGATGGTCTTGATCGTCTCAGTTG
TCTTAGCCGGATTCGGTGGTAAGTTTGTTGGTAATAAGCTGGGTGACCAGTTAGTTTCACAACAAACGACGACTGCAACG
ACTACGACGAGTTCAACTAGTCAGCAGGGTCAGCCTGGTGGCGGTGGCGGCGCCCCTAGTGGTAACACTGGTGGTAGCAA
GCCAAGCGGCAATATGCCTAGTGGCGGCGGTCAGACTGGTAATGCCAGTGCCACGACCGACACGAACTTAGATATTAATG
TCACGGTAATGGATTTAGTTGAACTCGGCGGCTTTGGCTTAGCCATCATGTTCCTGTCGATTATGCTGGCTTCTGGTGGC
ATACTACGACTACAGCCGAAGAAAGTTTTAATTGATTAG

Upstream 100 bases:

>100_bases
AAACCCAGCAAGTTCACAAATTAGTCAGATTTCCCGTGTAGGTTAAAAGCAGTGCAAAGCAATTGTCATACCAATACTTT
ATCTGAAGGAGGGTTTAAGC

Downstream 100 bases:

>100_bases
GAGGGGCGGCAATGTTAAAAGTAAATGATCTTGGTTACTGGTATGACCGCCAAGAAAATAGTCTATTTGAGAATGTAAAC
CTTGAATTTAAGTCGGGGAC

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MNFFKRAWLNLTAKKGRSILLVLVTSAIMLFVLAGLLIRNAADTATSNAKKSVGATVTLSANREAAFKKMRSATSTSKSS
RPKLTTSPVKLSDAKKIAKLSNVSSYNATVSTSANAKGFDTISTSGSSTGGGMKGMGGSSSSGTGDISITGVTNTNSVST
FESSSSKITKGRGITASDEGTNNVVIESELAKEDSLSVGDTIKLKATTGDKKTYTMKIVGIYKASSSASTQQGPGSTDVS
NSVYTSYTFANTVKGSKYKNTADSVTFAISDPAKVSSVKTSGKQLINTSKYSLSTDDSSYQTVKSSMNNVKSFADKIVWL
VAIAGTIILALIVILMIRERRYEIGVLLSLGESRWKIVAQFFAEMVMVLIVSVVLAGFGGKFVGNKLGDQLVSQQTTTAT
TTTSSTSQQGQPGGGGGAPSGNTGGSKPSGNMPSGGGQTGNASATTDTNLDINVTVMDLVELGGFGLAIMFLSIMLASGG
ILRLQPKKVLID

Sequences:

>Translated_492_residues
MNFFKRAWLNLTAKKGRSILLVLVTSAIMLFVLAGLLIRNAADTATSNAKKSVGATVTLSANREAAFKKMRSATSTSKSS
RPKLTTSPVKLSDAKKIAKLSNVSSYNATVSTSANAKGFDTISTSGSSTGGGMKGMGGSSSSGTGDISITGVTNTNSVST
FESSSSKITKGRGITASDEGTNNVVIESELAKEDSLSVGDTIKLKATTGDKKTYTMKIVGIYKASSSASTQQGPGSTDVS
NSVYTSYTFANTVKGSKYKNTADSVTFAISDPAKVSSVKTSGKQLINTSKYSLSTDDSSYQTVKSSMNNVKSFADKIVWL
VAIAGTIILALIVILMIRERRYEIGVLLSLGESRWKIVAQFFAEMVMVLIVSVVLAGFGGKFVGNKLGDQLVSQQTTTAT
TTTSSTSQQGQPGGGGGAPSGNTGGSKPSGNMPSGGGQTGNASATTDTNLDINVTVMDLVELGGFGLAIMFLSIMLASGG
ILRLQPKKVLID
>Mature_492_residues
MNFFKRAWLNLTAKKGRSILLVLVTSAIMLFVLAGLLIRNAADTATSNAKKSVGATVTLSANREAAFKKMRSATSTSKSS
RPKLTTSPVKLSDAKKIAKLSNVSSYNATVSTSANAKGFDTISTSGSSTGGGMKGMGGSSSSGTGDISITGVTNTNSVST
FESSSSKITKGRGITASDEGTNNVVIESELAKEDSLSVGDTIKLKATTGDKKTYTMKIVGIYKASSSASTQQGPGSTDVS
NSVYTSYTFANTVKGSKYKNTADSVTFAISDPAKVSSVKTSGKQLINTSKYSLSTDDSSYQTVKSSMNNVKSFADKIVWL
VAIAGTIILALIVILMIRERRYEIGVLLSLGESRWKIVAQFFAEMVMVLIVSVVLAGFGGKFVGNKLGDQLVSQQTTTAT
TTTSSTSQQGQPGGGGGAPSGNTGGSKPSGNMPSGGGQTGNASATTDTNLDINVTVMDLVELGGFGLAIMFLSIMLASGG
ILRLQPKKVLID

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 50920; Mature: 50920

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFKRAWLNLTAKKGRSILLVLVTSAIMLFVLAGLLIRNAADTATSNAKKSVGATVTLS
CCHHHHHHHHEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCEEEEEE
ANREAAFKKMRSATSTSKSSRPKLTTSPVKLSDAKKIAKLSNVSSYNATVSTSANAKGFD
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
TISTSGSSTGGGMKGMGGSSSSGTGDISITGVTNTNSVSTFESSSSKITKGRGITASDEG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCEECCCCCCCCCCC
TNNVVIESELAKEDSLSVGDTIKLKATTGDKKTYTMKIVGIYKASSSASTQQGPGSTDVS
CCCEEEEHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCC
NSVYTSYTFANTVKGSKYKNTADSVTFAISDPAKVSSVKTSGKQLINTSKYSLSTDDSSY
CCEEEEEEEHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCHHHHCCCCCEECCCCCHH
QTVKSSMNNVKSFADKIVWLVAIAGTIILALIVILMIRERRYEIGVLLSLGESRWKIVAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH
FFAEMVMVLIVSVVLAGFGGKFVGNKLGDQLVSQQTTTATTTTSSTSQQGQPGGGGGAPS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCC
GNTGGSKPSGNMPSGGGQTGNASATTDTNLDINVTVMDLVELGGFGLAIMFLSIMLASGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHCCC
ILRLQPKKVLID
EEEECCCCCCCC
>Mature Secondary Structure
MNFFKRAWLNLTAKKGRSILLVLVTSAIMLFVLAGLLIRNAADTATSNAKKSVGATVTLS
CCHHHHHHHHEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCEEEEEE
ANREAAFKKMRSATSTSKSSRPKLTTSPVKLSDAKKIAKLSNVSSYNATVSTSANAKGFD
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
TISTSGSSTGGGMKGMGGSSSSGTGDISITGVTNTNSVSTFESSSSKITKGRGITASDEG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCEECCCCCCCCCCC
TNNVVIESELAKEDSLSVGDTIKLKATTGDKKTYTMKIVGIYKASSSASTQQGPGSTDVS
CCCEEEEHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCC
NSVYTSYTFANTVKGSKYKNTADSVTFAISDPAKVSSVKTSGKQLINTSKYSLSTDDSSY
CCEEEEEEEHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCHHHHCCCCCEECCCCCHH
QTVKSSMNNVKSFADKIVWLVAIAGTIILALIVILMIRERRYEIGVLLSLGESRWKIVAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH
FFAEMVMVLIVSVVLAGFGGKFVGNKLGDQLVSQQTTTATTTTSSTSQQGQPGGGGGAPS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCC
GNTGGSKPSGNMPSGGGQTGNASATTDTNLDINVTVMDLVELGGFGLAIMFLSIMLASGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHCCC
ILRLQPKKVLID
EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]