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The map label for this gene is ydbC [H]

Identifier: 28377085

GI number: 28377085

Start: 120668

End: 121540

Strand: Direct

Name: ydbC [H]

Synonym: lp_0137

Alternate gene names: 28377085

Gene position: 120668-121540 (Clockwise)

Preceding gene: 28377084

Following gene: 28377086

Centisome position: 3.65

GC content: 46.28

Gene sequence:

>873_bases
ATGACAACGATTAATGCAGCTAACGCGGGTACTTACGCGTTTGATGATCAATTCAAAGTTAACCGGATGGGTTATGGCGT
CATGCAGTTAACGGGTCCTGGGACATGGGGACCATACGCTGATCCTGAAAATGGGGTCAAGGTAGTTAAGAAAGCACTGG
AATATGGCGTTAATTTCTTTGATACGGCTGATTCATACGGTCCATGGTTTGCTGACCGGTACTTAGCGGCGGGCTTGAAG
GATGCCGCTAATCGTGATCAGATCTTCATTTCTGATAAGGTCGGTCAAACGCGGCAAGGACCGAATGTGTGGACGCCACT
TGGTGAGCCACGGTATCTGCGTCAGCAAGTAGAAGTTTCAATGATGACACTGGGGATTGACCATGAAGACCTAGTATTCT
TACATCGAATTGACCCTCATTACTCGATTGCGGATCAAGTTGGTGAACTCAAAAAGCTTCAGGATGAAGGTAAAATCAAG
CATATCGGTCTGAGTCAAGTAACTGTTGATCAAATCAAGGAAGCGCAGCAAGTCGCTAAGATTGATGCCATTGAAAATCT
CTATAATGTCGCCAATCACGGTGATGATGACGTTGTTGACTACGCGGCCTCACAAAAGATGGCTTTTCTGCCATGGTTCC
CATTAGCAACGGGTGAACTGGCTCAGGCTGGGAGTGTCCTCAGCACGATGGCCCAAAAGTATCAGGTGAGCCCAGCGCAA
ATTGCCTTGGCTTGGCTATTGAAGCGGTCTGATAATATCATACCGATTCCAGGAACAAGTTCTATTGAGCATTTACGGGA
CAATGTGGCAGCCGCCAACGTTGATTTAACAACGGCCGATTTTAATGGATTAAGTCAATTAAGTGTTAAATGA

Upstream 100 bases:

>100_bases
ATGCACAACCCAACCCAAGGTTAACGAACAAAATGTTTGACCGCACTTGGGTCGATAGGAGTAAACTGAACATAATTAAT
AAACGATAAGGAGCGATTTG

Downstream 100 bases:

>100_bases
GTATTTAGGTCGGGAATTCCCGACCTTTTTGTTTGCCTAAAACGAGCTAAACGACGCTTGAAATTCATGGGGTTGACGGT
TAAAATGAATAAACATTGAA

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTTINAANAGTYAFDDQFKVNRMGYGVMQLTGPGTWGPYADPENGVKVVKKALEYGVNFFDTADSYGPWFADRYLAAGLK
DAANRDQIFISDKVGQTRQGPNVWTPLGEPRYLRQQVEVSMMTLGIDHEDLVFLHRIDPHYSIADQVGELKKLQDEGKIK
HIGLSQVTVDQIKEAQQVAKIDAIENLYNVANHGDDDVVDYAASQKMAFLPWFPLATGELAQAGSVLSTMAQKYQVSPAQ
IALAWLLKRSDNIIPIPGTSSIEHLRDNVAAANVDLTTADFNGLSQLSVK

Sequences:

>Translated_290_residues
MTTINAANAGTYAFDDQFKVNRMGYGVMQLTGPGTWGPYADPENGVKVVKKALEYGVNFFDTADSYGPWFADRYLAAGLK
DAANRDQIFISDKVGQTRQGPNVWTPLGEPRYLRQQVEVSMMTLGIDHEDLVFLHRIDPHYSIADQVGELKKLQDEGKIK
HIGLSQVTVDQIKEAQQVAKIDAIENLYNVANHGDDDVVDYAASQKMAFLPWFPLATGELAQAGSVLSTMAQKYQVSPAQ
IALAWLLKRSDNIIPIPGTSSIEHLRDNVAAANVDLTTADFNGLSQLSVK
>Mature_289_residues
TTINAANAGTYAFDDQFKVNRMGYGVMQLTGPGTWGPYADPENGVKVVKKALEYGVNFFDTADSYGPWFADRYLAAGLKD
AANRDQIFISDKVGQTRQGPNVWTPLGEPRYLRQQVEVSMMTLGIDHEDLVFLHRIDPHYSIADQVGELKKLQDEGKIKH
IGLSQVTVDQIKEAQQVAKIDAIENLYNVANHGDDDVVDYAASQKMAFLPWFPLATGELAQAGSVLSTMAQKYQVSPAQI
ALAWLLKRSDNIIPIPGTSSIEHLRDNVAAANVDLTTADFNGLSQLSVK

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=276, Percent_Identity=39.4927536231884, Blast_Score=191, Evalue=4e-50,
Organism=Escherichia coli, GI1788070, Length=313, Percent_Identity=26.1980830670927, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI87081735, Length=296, Percent_Identity=26.6891891891892, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788081, Length=262, Percent_Identity=24.8091603053435, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789375, Length=275, Percent_Identity=24.7272727272727, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI48994888, Length=248, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71998625, Length=275, Percent_Identity=23.6363636363636, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24646155, Length=230, Percent_Identity=27.8260869565217, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31891; Mature: 31760

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTINAANAGTYAFDDQFKVNRMGYGVMQLTGPGTWGPYADPENGVKVVKKALEYGVNFF
CCEECCCCCCCEEECCCEEEHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEE
DTADSYGPWFADRYLAAGLKDAANRDQIFISDKVGQTRQGPNVWTPLGEPRYLRQQVEVS
ECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
MMTLGIDHEDLVFLHRIDPHYSIADQVGELKKLQDEGKIKHIGLSQVTVDQIKEAQQVAK
HEEECCCCHHEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH
IDAIENLYNVANHGDDDVVDYAASQKMAFLPWFPLATGELAQAGSVLSTMAQKYQVSPAQ
HHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
IALAWLLKRSDNIIPIPGTSSIEHLRDNVAAANVDLTTADFNGLSQLSVK
HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TTINAANAGTYAFDDQFKVNRMGYGVMQLTGPGTWGPYADPENGVKVVKKALEYGVNFF
CEECCCCCCCEEECCCEEEHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEE
DTADSYGPWFADRYLAAGLKDAANRDQIFISDKVGQTRQGPNVWTPLGEPRYLRQQVEVS
ECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
MMTLGIDHEDLVFLHRIDPHYSIADQVGELKKLQDEGKIKHIGLSQVTVDQIKEAQQVAK
HEEECCCCHHEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH
IDAIENLYNVANHGDDDVVDYAASQKMAFLPWFPLATGELAQAGSVLSTMAQKYQVSPAQ
HHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
IALAWLLKRSDNIIPIPGTSSIEHLRDNVAAANVDLTTADFNGLSQLSVK
HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]