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The map label for this gene is yycB [H]

Identifier: 28377082

GI number: 28377082

Start: 118306

End: 119499

Strand: Direct

Name: yycB [H]

Synonym: lp_0134

Alternate gene names: 28377082

Gene position: 118306-119499 (Clockwise)

Preceding gene: 28377081

Following gene: 28377083

Centisome position: 3.58

GC content: 48.66

Gene sequence:

>1194_bases
ATGACCACAACACATCAACATAGCCGCTATTTAACACTTGGAATGATGTTAGCGGCAACGAATATGCGTTTACCAATTAC
AATGATGCCGGGATTAATCAGTTCTTTGAAACGGACACTGGGTTTGCCGAGCTCGATGGCGGGATTACTGACCACGATTC
CATTATTGACGTTTGCCATTATGTCCCCATTGATTGCACATTGGGGGCGGCGATTTGGCAACGAACTGACAATTTATGTC
ATGTTGATCTTTCTAGCCGTTGGGAGTTATCTGCGGGTCATCCCAACGATTGCTGCCCTTTTCATTGGGACGTTACTAGT
CGGGATTGGCGCGGACGGTGGCAATGTCTTGATTCCAGCGATTATTAAAGATAATTTTCCGACGAAGATTCCAGTCGCAA
CTAGTCAATACACGCTCTCAATGCTATTAGTCGGTTCACTGGGAACGGGACTTTCGGGAGTGTTGGCGGCACACTGGTCG
TTACCACTAACGATGGCGGTGCTATCGGTGATTGGACTAATTAATTTGGTTGTCTGGTTGCCAAACTTGAAATACAATCA
TCGCGCACCAACAGTTGCGATGACCGCGAGTGATGGGCAGTCAACGGCAACTCACGGGAGTGTTTGGCGGCGGCCGTTAG
CGTGGGTCGTTACGGCCTTTTTCGGCTTGCAAGCACTAGTCTACTATTCATTACTGACTTGGTTACCAACGGTATTTGTT
GCCCACGGCTTCTCCTTGATTGTGGCTGGCAATTTAGTTACGGTCATGCAATTGAGCGGCCTACCGATGTCATATTTAGT
GCCAGCGACTTCTGGTCATCGGCGCGGCGTTTGGGCAATGATTATGGTGGTAGGTGTCGGTTTTATTGCGGGAATTGGTG
GTATCTTACTTTCCGGAACGAATTTTTGGGTGGCAGCACTGTCCTGCGTCTTACTAGGATTAGGCTCTGGAGCAGCCTTC
AGTTTGGCAGTCGTCTTCTTTACGCAAAAAACGACCAATGGGTTTGAAACGGCTGACTTATCTGGTATGGCCCAATCCGC
GGGCTATTTGTTAGCTGCAGTGGGGCCCGTACTATTCGGCTGGTTAGGCGGTCAATTAGGCTGGGGACCAGTACTCTGGT
TAGCTATCATTCTTTCCGCGTTACTAGCATTATCCGGCAGCATCATTTTCCAGCATGCAACGATTTATGAGTAA

Upstream 100 bases:

>100_bases
GACCGGTTTTTACCGGGGTTCTTAGCAACGCTTTAGTTTTTTTGCTTTTTAGTTCGACAATTATCGAACTAAAATCTTGG
AAAGAAGATGTCAACTACTT

Downstream 100 bases:

>100_bases
TTAATATCACAATAATGCAGAACGAGATTGGCCCAAGTCAATTTCGTTCTTTTTTTGAAACTTTATCTTTGCCTTAGAGT
TACTCTAAGGGACTACACTA

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTTTHQHSRYLTLGMMLAATNMRLPITMMPGLISSLKRTLGLPSSMAGLLTTIPLLTFAIMSPLIAHWGRRFGNELTIYV
MLIFLAVGSYLRVIPTIAALFIGTLLVGIGADGGNVLIPAIIKDNFPTKIPVATSQYTLSMLLVGSLGTGLSGVLAAHWS
LPLTMAVLSVIGLINLVVWLPNLKYNHRAPTVAMTASDGQSTATHGSVWRRPLAWVVTAFFGLQALVYYSLLTWLPTVFV
AHGFSLIVAGNLVTVMQLSGLPMSYLVPATSGHRRGVWAMIMVVGVGFIAGIGGILLSGTNFWVAALSCVLLGLGSGAAF
SLAVVFFTQKTTNGFETADLSGMAQSAGYLLAAVGPVLFGWLGGQLGWGPVLWLAIILSALLALSGSIIFQHATIYE

Sequences:

>Translated_397_residues
MTTTHQHSRYLTLGMMLAATNMRLPITMMPGLISSLKRTLGLPSSMAGLLTTIPLLTFAIMSPLIAHWGRRFGNELTIYV
MLIFLAVGSYLRVIPTIAALFIGTLLVGIGADGGNVLIPAIIKDNFPTKIPVATSQYTLSMLLVGSLGTGLSGVLAAHWS
LPLTMAVLSVIGLINLVVWLPNLKYNHRAPTVAMTASDGQSTATHGSVWRRPLAWVVTAFFGLQALVYYSLLTWLPTVFV
AHGFSLIVAGNLVTVMQLSGLPMSYLVPATSGHRRGVWAMIMVVGVGFIAGIGGILLSGTNFWVAALSCVLLGLGSGAAF
SLAVVFFTQKTTNGFETADLSGMAQSAGYLLAAVGPVLFGWLGGQLGWGPVLWLAIILSALLALSGSIIFQHATIYE
>Mature_396_residues
TTTHQHSRYLTLGMMLAATNMRLPITMMPGLISSLKRTLGLPSSMAGLLTTIPLLTFAIMSPLIAHWGRRFGNELTIYVM
LIFLAVGSYLRVIPTIAALFIGTLLVGIGADGGNVLIPAIIKDNFPTKIPVATSQYTLSMLLVGSLGTGLSGVLAAHWSL
PLTMAVLSVIGLINLVVWLPNLKYNHRAPTVAMTASDGQSTATHGSVWRRPLAWVVTAFFGLQALVYYSLLTWLPTVFVA
HGFSLIVAGNLVTVMQLSGLPMSYLVPATSGHRRGVWAMIMVVGVGFIAGIGGILLSGTNFWVAALSCVLLGLGSGAAFS
LAVVFFTQKTTNGFETADLSGMAQSAGYLLAAVGPVLFGWLGGQLGWGPVLWLAIILSALLALSGSIIFQHATIYE

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=385, Percent_Identity=36.3636363636364, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1786536, Length=350, Percent_Identity=26.5714285714286, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41988; Mature: 41856

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
>Mature Secondary Structure 
TTTHQHSRYLTLGMMLAATNMRLPITMMPGLISSLKRTLGLPSSMAGLLTTIPLLTFAI
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MSPLIAHWGRRFGNELTIYVMLIFLAVGSYLRVIPTIAALFIGTLLVGIGADGGNVLIPA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
IIKDNFPTKIPVATSQYTLSMLLVGSLGTGLSGVLAAHWSLPLTMAVLSVIGLINLVVWL
EECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
PNLKYNHRAPTVAMTASDGQSTATHGSVWRRPLAWVVTAFFGLQALVYYSLLTWLPTVFV
CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHGFSLIVAGNLVTVMQLSGLPMSYLVPATSGHRRGVWAMIMVVGVGFIAGIGGILLSGT
HCCHHEEECCCHHEEHHHCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
NFWVAALSCVLLGLGSGAAFSLAVVFFTQKTTNGFETADLSGMAQSAGYLLAAVGPVLFG
HHHHHHHHHHHHHCCCCHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
WLGGQLGWGPVLWLAIILSALLALSGSIIFQHATIYE
HHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]