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The map label for this gene is yceK [H]

Identifier: 28377081

GI number: 28377081

Start: 117876

End: 118241

Strand: Direct

Name: yceK [H]

Synonym: lp_0133

Alternate gene names: 28377081

Gene position: 117876-118241 (Clockwise)

Preceding gene: 28377080

Following gene: 28377082

Centisome position: 3.56

GC content: 43.99

Gene sequence:

>366_bases
TTGGCTAGCTGCCTTTTTTGTTACTTGTCCTTGAACATGATGTTAATTCAGTGTATTGTTAGTTTCATGAATATCGAAAT
AAGCAAACAAGATCAGGCTGATCAGCAACGAGTGGCGATTTTCAAAGCACTGGCCGATGCTAACCGATTACGGATTATCC
GGGTGCTCTATCAAGCACAACGGGAAATGACTTGCAGCGAAGTGGGGGCGCAATTAAATATCAGCAAGTCAACCATCTCT
TATCACTTTAAGACCTTGCGGTTAGTGGGTCTCACCAATACGCGACGAAAGGCACAGACGAAGTATCTATCCTTACAATT
AGCGACCTTTGACCGGTTTTTACCGGGGTTCTTAGCAACGCTTTAG

Upstream 100 bases:

>100_bases
TTTGTTAATTAACCTAGGTTTAATTTTGTGGTTAGTTCCTGATATTTGGAAGAACGGCAAACGGGCAGTTTCCTAGGTGT
TTGGTAGTTAGTCTATTAAA

Downstream 100 bases:

>100_bases
TTTTTTTGCTTTTTAGTTCGACAATTATCGAACTAAAATCTTGGAAAGAAGATGTCAACTACTTATGACCACAACACATC
AACATAGCCGCTATTTAACA

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MASCLFCYLSLNMMLIQCIVSFMNIEISKQDQADQQRVAIFKALADANRLRIIRVLYQAQREMTCSEVGAQLNISKSTIS
YHFKTLRLVGLTNTRRKAQTKYLSLQLATFDRFLPGFLATL

Sequences:

>Translated_121_residues
MASCLFCYLSLNMMLIQCIVSFMNIEISKQDQADQQRVAIFKALADANRLRIIRVLYQAQREMTCSEVGAQLNISKSTIS
YHFKTLRLVGLTNTRRKAQTKYLSLQLATFDRFLPGFLATL
>Mature_120_residues
ASCLFCYLSLNMMLIQCIVSFMNIEISKQDQADQQRVAIFKALADANRLRIIRVLYQAQREMTCSEVGAQLNISKSTISY
HFKTLRLVGLTNTRRKAQTKYLSLQLATFDRFLPGFLATL

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 13862; Mature: 13730

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASCLFCYLSLNMMLIQCIVSFMNIEISKQDQADQQRVAIFKALADANRLRIIRVLYQAQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
REMTCSEVGAQLNISKSTISYHFKTLRLVGLTNTRRKAQTKYLSLQLATFDRFLPGFLAT
HCCCHHHCCCEEECCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
L
C
>Mature Secondary Structure 
ASCLFCYLSLNMMLIQCIVSFMNIEISKQDQADQQRVAIFKALADANRLRIIRVLYQAQ
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
REMTCSEVGAQLNISKSTISYHFKTLRLVGLTNTRRKAQTKYLSLQLATFDRFLPGFLAT
HCCCHHHCCCEEECCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377 [H]