| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377051
Identifier: 28377051
GI number: 28377051
Start: 88467
End: 89246
Strand: Direct
Name: 28377051
Synonym: lp_0098
Alternate gene names: NA
Gene position: 88467-89246 (Clockwise)
Preceding gene: 28377050
Following gene: 28377057
Centisome position: 2.67
GC content: 46.15
Gene sequence:
>780_bases ATGATGACATCAACACCACGGTTATTACAAGCCATTCAACAAACGACCACCGCAATTTTAAAAACAAACCTTGTTGGTAT TTACCTGCATGGATCCTATGTTTTAGGCTCATATAACGAACAGGTGAGCGATTTAGACTATCTGATCGTTGTTCGGCGTT CGTTAACATTAGCTGAAAAACGGCAGTTAATGACAGCTACCATAACGCAATTGTGGCCATTAGCGCCACACAAGGGATTG GAGTTTCATGTGCTGTTACTGAGTGCAACCCAGCATTTTGTGCATCCTTGCCCATTCGATTTTCATTTTTCAAAATACCA TTATGAGGATTATCAACGGACACCGCTAGCCTACCTAAAAGCGATGCACGGCACGGATCCTGATCTTGCTGCCCACTTAA CGATTCTCCAAGCAGCGGGACAAGTCTTGCTTGGACCAGCCATTACAACGGTCTTTGGCCCCATTCCTGCGGTGGCCTAC TGGGACAGTATCAAGTCTGATATCGCGAATGCTGAAACGGCGATCGTTCAGTTACCAATGTATACGGTATTAAACCTTTG TCGAGTTCGTGCTTACCAGCAAGATCAGTTAATTATTTCTAAGCAGGCCGGGGGTGAATGGGGGTTACAACAGCTGCCAA CACAGTGGCATCCGTTGATCAGGCAGGCGTTAGCAGCCTATGCTGGTCAACAGGACGAACAGGTTATACGATGGTCACGT CCAAACTTAGTGGCGTTTGCACGAATCATGTTAGCCGAGTTGGGCTTAAAATCAGAATAG
Upstream 100 bases:
>100_bases TTCTATCGAACGTGATTGGGAAAAGCTTTTCGATGAAGCGTGGTTGATTAAGCATCTTCGTGGCTATCGCTAAGCTCAAG ACTTAGAGGGGAGTGGTTTG
Downstream 100 bases:
>100_bases TTTGTGAGTTTAACAAAAAATGCTTACTGGCGATCATCCACCAGTAAGCATTTTTGTCACCACCAACTTAAAGTCGGCTG TTATAAATCAAGAAACTAAT
Product: adenylyl transferase (putative)
Products: NA
Alternate protein names: Nucleotidyltransferase; Adenylyl Transferase; GCN5-Related N-Acetyltransferase
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MMTSTPRLLQAIQQTTTAILKTNLVGIYLHGSYVLGSYNEQVSDLDYLIVVRRSLTLAEKRQLMTATITQLWPLAPHKGL EFHVLLLSATQHFVHPCPFDFHFSKYHYEDYQRTPLAYLKAMHGTDPDLAAHLTILQAAGQVLLGPAITTVFGPIPAVAY WDSIKSDIANAETAIVQLPMYTVLNLCRVRAYQQDQLIISKQAGGEWGLQQLPTQWHPLIRQALAAYAGQQDEQVIRWSR PNLVAFARIMLAELGLKSE
Sequences:
>Translated_259_residues MMTSTPRLLQAIQQTTTAILKTNLVGIYLHGSYVLGSYNEQVSDLDYLIVVRRSLTLAEKRQLMTATITQLWPLAPHKGL EFHVLLLSATQHFVHPCPFDFHFSKYHYEDYQRTPLAYLKAMHGTDPDLAAHLTILQAAGQVLLGPAITTVFGPIPAVAY WDSIKSDIANAETAIVQLPMYTVLNLCRVRAYQQDQLIISKQAGGEWGLQQLPTQWHPLIRQALAAYAGQQDEQVIRWSR PNLVAFARIMLAELGLKSE >Mature_259_residues MMTSTPRLLQAIQQTTTAILKTNLVGIYLHGSYVLGSYNEQVSDLDYLIVVRRSLTLAEKRQLMTATITQLWPLAPHKGL EFHVLLLSATQHFVHPCPFDFHFSKYHYEDYQRTPLAYLKAMHGTDPDLAAHLTILQAAGQVLLGPAITTVFGPIPAVAY WDSIKSDIANAETAIVQLPMYTVLNLCRVRAYQQDQLIISKQAGGEWGLQQLPTQWHPLIRQALAAYAGQQDEQVIRWSR PNLVAFARIMLAELGLKSE
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29106; Mature: 29106
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTSTPRLLQAIQQTTTAILKTNLVGIYLHGSYVLGSYNEQVSDLDYLIVVRRSLTLAEK CCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHH RQLMTATITQLWPLAPHKGLEFHVLLLSATQHFVHPCPFDFHFSKYHYEDYQRTPLAYLK HHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCHHHHCHHCCCHHHHHH AMHGTDPDLAAHLTILQAAGQVLLGPAITTVFGPIPAVAYWDSIKSDIANAETAIVQLPM HHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHEECHH YTVLNLCRVRAYQQDQLIISKQAGGEWGLQQLPTQWHPLIRQALAAYAGQQDEQVIRWSR HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCC PNLVAFARIMLAELGLKSE CCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMTSTPRLLQAIQQTTTAILKTNLVGIYLHGSYVLGSYNEQVSDLDYLIVVRRSLTLAEK CCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHH RQLMTATITQLWPLAPHKGLEFHVLLLSATQHFVHPCPFDFHFSKYHYEDYQRTPLAYLK HHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCHHHHCHHCCCHHHHHH AMHGTDPDLAAHLTILQAAGQVLLGPAITTVFGPIPAVAYWDSIKSDIANAETAIVQLPM HHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHEECHH YTVLNLCRVRAYQQDQLIISKQAGGEWGLQQLPTQWHPLIRQALAAYAGQQDEQVIRWSR HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCC PNLVAFARIMLAELGLKSE CCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA