Click here to switch to the map view.

The map label for this gene is 28377050

Identifier: 28377050

GI number: 28377050

Start: 87460

End: 88209

Strand: Direct

Name: 28377050

Synonym: lp_0096

Alternate gene names: NA

Gene position: 87460-88209 (Clockwise)

Preceding gene: 28377048

Following gene: 28377051

Centisome position: 2.64

GC content: 46.67

Gene sequence:

>750_bases
ATGAGCTTTAGAGTTGTAGCCGGTTATTTCGGTGAATTTAGTGATGAAGCGAAGCGGGCCAATCAAGACTTAGGTGTAAT
CGGCATGTCGTTTCAGTATCAATGTAATCTCGTTTATCCAGAAGGGGCGGGGCCAAACTTTGGTTTTCGAACCGACGCGC
AAGCGATTGATGTGTTCGATGCGTTAAAAGTTGGTTACGATGGTTTCAAAGTGCAAGCTGGCCTGATTAAGGCGATGGGA
CTAGTTGATTATCAATTGGTTGGTGGTCGTTACGAACTAGTCGGCCATGATTTCCGAGAATTACCTTTAGCTGAGATCAA
TGCGAACTTGGAAACGATGCCCGGACTCTTGGCTCAGGGACCGATGCCAGTTCGATATGTGACTTATCGTCGGACGGATG
ACCCTATTGACGCGGTTGGCTTTAGTGGCAACTGGGCACTAGGAGATAGCGGTGGCTTTCGACAGTTAAGTGAGACGTTG
GCAGAACCAATGCAAGCACCAGTGGCGGCGCTAATTAAGGCAATTGATCAACTTGGTTTAACGTTACAACAAATTAATCT
ACCCACACCGCAAAGTTCAACGGCTTTGCCGACACATTTGAGTGATGATGTTCATCAAGCGAACGTTGACGTGTGGGTGG
TGTTAACACAACCACAAGGTGACGAGCAGCAAGTTTTGCAGACCATTCATAACGCTCAAGAGTGTAATGAAAAATTGTGC
GAAGCGCTGACTCGTGTTTATTTGAAGTAG

Upstream 100 bases:

>100_bases
AAGCATTAATTACTTTCATTATGCGCGAATAAAAATTATAATGACATCAATAATGTAAACGGATTCAATATTGCGGTGAC
AAGATTAAGGAGGGCTAAAC

Downstream 100 bases:

>100_bases
GATGTTTCACGTGAAACAACTGGCACTTGGCAGTCCGTTATTTTCTTTAGTGCGTTGTATGATATGATACGCACGAACCG
TAACACATCTTCACGGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSFRVVAGYFGEFSDEAKRANQDLGVIGMSFQYQCNLVYPEGAGPNFGFRTDAQAIDVFDALKVGYDGFKVQAGLIKAMG
LVDYQLVGGRYELVGHDFRELPLAEINANLETMPGLLAQGPMPVRYVTYRRTDDPIDAVGFSGNWALGDSGGFRQLSETL
AEPMQAPVAALIKAIDQLGLTLQQINLPTPQSSTALPTHLSDDVHQANVDVWVVLTQPQGDEQQVLQTIHNAQECNEKLC
EALTRVYLK

Sequences:

>Translated_249_residues
MSFRVVAGYFGEFSDEAKRANQDLGVIGMSFQYQCNLVYPEGAGPNFGFRTDAQAIDVFDALKVGYDGFKVQAGLIKAMG
LVDYQLVGGRYELVGHDFRELPLAEINANLETMPGLLAQGPMPVRYVTYRRTDDPIDAVGFSGNWALGDSGGFRQLSETL
AEPMQAPVAALIKAIDQLGLTLQQINLPTPQSSTALPTHLSDDVHQANVDVWVVLTQPQGDEQQVLQTIHNAQECNEKLC
EALTRVYLK
>Mature_248_residues
SFRVVAGYFGEFSDEAKRANQDLGVIGMSFQYQCNLVYPEGAGPNFGFRTDAQAIDVFDALKVGYDGFKVQAGLIKAMGL
VDYQLVGGRYELVGHDFRELPLAEINANLETMPGLLAQGPMPVRYVTYRRTDDPIDAVGFSGNWALGDSGGFRQLSETLA
EPMQAPVAALIKAIDQLGLTLQQINLPTPQSSTALPTHLSDDVHQANVDVWVVLTQPQGDEQQVLQTIHNAQECNEKLCE
ALTRVYLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27283; Mature: 27152

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRVVAGYFGEFSDEAKRANQDLGVIGMSFQYQCNLVYPEGAGPNFGFRTDAQAIDVFD
CCEEEEEHHHCCCCHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHH
ALKVGYDGFKVQAGLIKAMGLVDYQLVGGRYELVGHDFRELPLAEINANLETMPGLLAQG
HHHHCCCCEEEHHHHHHHHHHHEEEEECCEEEECCCCHHHCCHHHHCCCHHHHCHHHHCC
PMPVRYVTYRRTDDPIDAVGFSGNWALGDSGGFRQLSETLAEPMQAPVAALIKAIDQLGL
CCCEEEEEEECCCCCHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TLQQINLPTPQSSTALPTHLSDDVHQANVDVWVVLTQPQGDEQQVLQTIHNAQECNEKLC
EEEECCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EALTRVYLK
HHHHHHHCC
>Mature Secondary Structure 
SFRVVAGYFGEFSDEAKRANQDLGVIGMSFQYQCNLVYPEGAGPNFGFRTDAQAIDVFD
CEEEEEHHHCCCCHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHH
ALKVGYDGFKVQAGLIKAMGLVDYQLVGGRYELVGHDFRELPLAEINANLETMPGLLAQG
HHHHCCCCEEEHHHHHHHHHHHEEEEECCEEEECCCCHHHCCHHHHCCCHHHHCHHHHCC
PMPVRYVTYRRTDDPIDAVGFSGNWALGDSGGFRQLSETLAEPMQAPVAALIKAIDQLGL
CCCEEEEEEECCCCCHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TLQQINLPTPQSSTALPTHLSDDVHQANVDVWVVLTQPQGDEQQVLQTIHNAQECNEKLC
EEEECCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EALTRVYLK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA