Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is yxeH [H]

Identifier: 28212036

GI number: 28212036

Start: 2592463

End: 2593425

Strand: Direct

Name: yxeH [H]

Synonym: CTC02452

Alternate gene names: 28212036

Gene position: 2592463-2593425 (Clockwise)

Preceding gene: 28212034

Following gene: 28212042

Centisome position: 92.61

GC content: 26.79

Gene sequence:

>963_bases
TTGTATACAACAATGATTTTATCTTTTAAATTTTTAACTGTCAATTATTTTGCAAAGTTTTATAGTAAATGCCAATTGTT
TATAATGTATTTCTTTAAACTAAATGCTATACTAAATACATTAGATTTAACTAAAGAAAGGCGGAACCAATATATGTACA
AATTAGTAGCTATAGATATGGATGGAACCTTATTAGATGATAGCAAAACTATACCTAATGAAAATATAAGAGCCATAAAA
GAGGCCTCAAACAAAGGTATAAAAATTGCATTAGCCACTGGTAGGCCTTTAACAGGTATAAAAAATTATTTAAATGTCTT
AGGATTAAATTCACCAGATAACTTTTCCATAATCTATAATGGAGCTTTAATACAAAATAATACTAATAAAAAAATAATTT
CTCAGTGCCTACTAAATTACGATGATTTGATGTATTTTCACAATCTAAGTAGAAAATTTCATATTCATATGAATGTGTTT
ACTAAGGATTCTTGTATAACTTCTAAATTAGGTAAATATACCACCTTAGAAGCAAAATGGAGTAACATAGATGTAAAAAT
AGTGGATTTTAATAATTTAGATAAAAATATAGAAATTACTAAGGTTATTTTTGCCGATGAACCAGAACTAATATCAAAAA
TAATGGATAATTTAGATGATGATGTATACTCAAAGTATGCTATGGCTAGAAGTGCACCTTACTTTCTTGAATTTTTTAAT
AAAGAAATTAATAAAGGTATTGCAGTAAAAAAGTATGCTGATAGCTTAAATATACATAAAGAGGAAATCATTTGTATTGG
CGATGCAGGCAATGACATTGAAATGATTAAGTTTGCTGGACTAGGTATTGCTATGGAAAATGCTTTTCCAGAAATAAAGA
ATGTAGCAAACTACATAACCCTATCAAATGAAAATGCAGGAGTAGCTCACGCAATAGATAAATTTATACTTTCTAAGTTT
TAA

Upstream 100 bases:

>100_bases
GTGTGGTTTTACCCGCATCTGGGTGAGATATTATTGCAAATGTTCTTCTTTTTTCTATTTCCTTTTCAAGACCTTTCACT
AAAACCTCTCCTCTTCATTT

Downstream 100 bases:

>100_bases
TCTATTATATGAACTATCCTATTTATAAAGAGTAAACCCTTTGGAATATCTAAGGATTTACTCTTTAATATTATTTATCT
AATACAAATCCTATCTTTCT

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MYTTMILSFKFLTVNYFAKFYSKCQLFIMYFFKLNAILNTLDLTKERRNQYMYKLVAIDMDGTLLDDSKTIPNENIRAIK
EASNKGIKIALATGRPLTGIKNYLNVLGLNSPDNFSIIYNGALIQNNTNKKIISQCLLNYDDLMYFHNLSRKFHIHMNVF
TKDSCITSKLGKYTTLEAKWSNIDVKIVDFNNLDKNIEITKVIFADEPELISKIMDNLDDDVYSKYAMARSAPYFLEFFN
KEINKGIAVKKYADSLNIHKEEIICIGDAGNDIEMIKFAGLGIAMENAFPEIKNVANYITLSNENAGVAHAIDKFILSKF

Sequences:

>Translated_320_residues
MYTTMILSFKFLTVNYFAKFYSKCQLFIMYFFKLNAILNTLDLTKERRNQYMYKLVAIDMDGTLLDDSKTIPNENIRAIK
EASNKGIKIALATGRPLTGIKNYLNVLGLNSPDNFSIIYNGALIQNNTNKKIISQCLLNYDDLMYFHNLSRKFHIHMNVF
TKDSCITSKLGKYTTLEAKWSNIDVKIVDFNNLDKNIEITKVIFADEPELISKIMDNLDDDVYSKYAMARSAPYFLEFFN
KEINKGIAVKKYADSLNIHKEEIICIGDAGNDIEMIKFAGLGIAMENAFPEIKNVANYITLSNENAGVAHAIDKFILSKF
>Mature_320_residues
MYTTMILSFKFLTVNYFAKFYSKCQLFIMYFFKLNAILNTLDLTKERRNQYMYKLVAIDMDGTLLDDSKTIPNENIRAIK
EASNKGIKIALATGRPLTGIKNYLNVLGLNSPDNFSIIYNGALIQNNTNKKIISQCLLNYDDLMYFHNLSRKFHIHMNVF
TKDSCITSKLGKYTTLEAKWSNIDVKIVDFNNLDKNIEITKVIFADEPELISKIMDNLDDDVYSKYAMARSAPYFLEFFN
KEINKGIAVKKYADSLNIHKEEIICIGDAGNDIEMIKFAGLGIAMENAFPEIKNVANYITLSNENAGVAHAIDKFILSKF

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=266, Percent_Identity=40.9774436090226, Blast_Score=218, Evalue=5e-58,
Organism=Escherichia coli, GI87081741, Length=275, Percent_Identity=24, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87081790, Length=273, Percent_Identity=24.9084249084249, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787043, Length=268, Percent_Identity=24.6268656716418, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 36586; Mature: 36586

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTTMILSFKFLTVNYFAKFYSKCQLFIMYFFKLNAILNTLDLTKERRNQYMYKLVAIDM
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEC
DGTLLDDSKTIPNENIRAIKEASNKGIKIALATGRPLTGIKNYLNVLGLNSPDNFSIIYN
CCEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEE
GALIQNNTNKKIISQCLLNYDDLMYFHNLSRKFHIHMNVFTKDSCITSKLGKYTTLEAKW
CEEEECCCCHHHHHHHHHCHHHHHHHHCCCEEEEEEEEEEECCHHHHHHCCCEEEEEEEE
SNIDVKIVDFNNLDKNIEITKVIFADEPELISKIMDNLDDDVYSKYAMARSAPYFLEFFN
CCEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH
KEINKGIAVKKYADSLNIHKEEIICIGDAGNDIEMIKFAGLGIAMENAFPEIKNVANYIT
HHHHCCEEEEEHHCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEHHCCHHHHHHHHEEE
LSNENAGVAHAIDKFILSKF
ECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MYTTMILSFKFLTVNYFAKFYSKCQLFIMYFFKLNAILNTLDLTKERRNQYMYKLVAIDM
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEC
DGTLLDDSKTIPNENIRAIKEASNKGIKIALATGRPLTGIKNYLNVLGLNSPDNFSIIYN
CCEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEE
GALIQNNTNKKIISQCLLNYDDLMYFHNLSRKFHIHMNVFTKDSCITSKLGKYTTLEAKW
CEEEECCCCHHHHHHHHHCHHHHHHHHCCCEEEEEEEEEEECCHHHHHHCCCEEEEEEEE
SNIDVKIVDFNNLDKNIEITKVIFADEPELISKIMDNLDDDVYSKYAMARSAPYFLEFFN
CCEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH
KEINKGIAVKKYADSLNIHKEEIICIGDAGNDIEMIKFAGLGIAMENAFPEIKNVANYIT
HHHHCCEEEEEHHCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEHHCCHHHHHHHHEEE
LSNENAGVAHAIDKFILSKF
ECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]