| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211910
Identifier: 28211910
GI number: 28211910
Start: 2442723
End: 2443196
Strand: Direct
Name: 28211910
Synonym: CTC02314
Alternate gene names: NA
Gene position: 2442723-2443196 (Clockwise)
Preceding gene: 28211909
Following gene: 28211919
Centisome position: 87.26
GC content: 28.9
Gene sequence:
>474_bases ATGTTTATTTATTGTTTATACGCTTTTTTAACTTCTCTTGGTTTTGGTATTATTTTTAATGTTAAAGGAAAAAATTTATT TCTCACAGCTTTAGGCGGAGGACTAGGATGGGGTGTATATCTTGTATCTAAGAAATATAATTGTTCAGAGATACTTAGTT ATTTTAATGCTACAATATTTATATCAACCTATTCAGAAATTGTAGCAAGAAAATTTAAAGCTCCTGTTACTGTTTTTTTA GCTTCTTCCTTAATACCTTTAGTGCCTGGAAGTGGCATGTATTACACTATGTTTGAATGTATAACTGGTAATGTTAACGC CTCCTTATCTATAGGACTTAATACACTATCAATTGCAGGAGCTTTAGCTACTGGAATGATATTAGTATCATCTTTTACTA AACTTATTTCATCTAAGAAGAAAGTTTATTATACAAAGGAACTTACATTAATAAAAGAGAGTGCTAAAAGATAA
Upstream 100 bases:
>100_bases TCTAAACTTACTGAAGCCTTTTTAATAGCTGCTGCTATAGCTATAGGTGCTGGAATTACACTATCACTGGGAATTAATTT TTTAGAGAGGTGATTTACAT
Downstream 100 bases:
>100_bases TCTAGATTATCTTTTAGCACTCTCTTTTATTAATACTTTATGGGATTAGGTATCTTACAGCTCCACCTGGTCCTAACGGA ATATTAAATATAATAAAGAA
Product: putative p14 protein
Products: NA
Alternate protein names: Threonine/Serine Exporter
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MFIYCLYAFLTSLGFGIIFNVKGKNLFLTALGGGLGWGVYLVSKKYNCSEILSYFNATIFISTYSEIVARKFKAPVTVFL ASSLIPLVPGSGMYYTMFECITGNVNASLSIGLNTLSIAGALATGMILVSSFTKLISSKKKVYYTKELTLIKESAKR
Sequences:
>Translated_157_residues MFIYCLYAFLTSLGFGIIFNVKGKNLFLTALGGGLGWGVYLVSKKYNCSEILSYFNATIFISTYSEIVARKFKAPVTVFL ASSLIPLVPGSGMYYTMFECITGNVNASLSIGLNTLSIAGALATGMILVSSFTKLISSKKKVYYTKELTLIKESAKR >Mature_157_residues MFIYCLYAFLTSLGFGIIFNVKGKNLFLTALGGGLGWGVYLVSKKYNCSEILSYFNATIFISTYSEIVARKFKAPVTVFL ASSLIPLVPGSGMYYTMFECITGNVNASLSIGLNTLSIAGALATGMILVSSFTKLISSKKKVYYTKELTLIKESAKR
Specific function: Unknown
COG id: COG3610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17117; Mature: 17117
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIYCLYAFLTSLGFGIIFNVKGKNLFLTALGGGLGWGVYLVSKKYNCSEILSYFNATIF CHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHEEE ISTYSEIVARKFKAPVTVFLASSLIPLVPGSGMYYTMFECITGNVNASLSIGLNTLSIAG EEEHHHHHHHHHCCCHHEEHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHH ALATGMILVSSFTKLISSKKKVYYTKELTLIKESAKR HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCC >Mature Secondary Structure MFIYCLYAFLTSLGFGIIFNVKGKNLFLTALGGGLGWGVYLVSKKYNCSEILSYFNATIF CHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHEEE ISTYSEIVARKFKAPVTVFLASSLIPLVPGSGMYYTMFECITGNVNASLSIGLNTLSIAG EEEHHHHHHHHHCCCHHEEHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHH ALATGMILVSSFTKLISSKKKVYYTKELTLIKESAKR HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA