Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is yjjP [C]

Identifier: 28211909

GI number: 28211909

Start: 2441951

End: 2442715

Strand: Direct

Name: yjjP [C]

Synonym: CTC02313

Alternate gene names: 28211909

Gene position: 2441951-2442715 (Clockwise)

Preceding gene: 28211896

Following gene: 28211910

Centisome position: 87.24

GC content: 30.46

Gene sequence:

>765_bases
ATGAACATTGACAAAATTCTTCATTTAGTAACCTATGCAGGCCAGATAATGCTTGAAAATGGAGCAGAAACATATCGTGT
AGAAGAAACTATGAAGCTAATCTGCAATTCTTATAAAATATTTAATACAGATATTTTTGTTATACCCACTACCATAATCA
TATCTGTATCATTCGATTCTGGACAAACCTTAACTAAAGTAAAAAGAATAGAAAATAGAACAGTAAACTTAGATAAAGTT
TCAAAAGTTAATGATCTATCACGAAAAATATGTACTAATCATTTACCCTTAAATACTATAGAAGAAACATTAGATAGTAT
AAATTCTAACGATAAATATAGTAACATTATGCAAATCTTTGCTTTTTCTATGGTGGCAGGTTTTTTTACATTATTTTTCG
GTGGAACCATTAAGGATTTCTTTGTATCTCTTTTTATTGGGGCTCTATTACAAATTATATCCTTAAGATTATCCCAAATT
GAAACTAATGCTTTTTTTATTAATATATTATGTGGCTCATCAACCACCTTTATCGCATATTTCAGCACCACTATGGGATT
TGGCAATAGTATGAACAAAATAATAATAGGTTCTTTAATGCCTTTAGTTCCTGGTCTCTCTATAACAAATGCTATACGGG
ACATCATAGCTGGTGAATTGGTAGCAGGTCTTTCTAAACTTACTGAAGCCTTTTTAATAGCTGCTGCTATAGCTATAGGT
GCTGGAATTACACTATCACTGGGAATTAATTTTTTAGAGAGGTGA

Upstream 100 bases:

>100_bases
AAAATAATAGCAACTTAAGTCTACATTCTATACATTTTTCTGCAAAATTATGTTATAATACTTCATAAATGTATATTTTT
TTAGAATAGAAGGTAAAATT

Downstream 100 bases:

>100_bases
TTTACATATGTTTATTTATTGTTTATACGCTTTTTTAACTTCTCTTGGTTTTGGTATTATTTTTAATGTTAAAGGAAAAA
ATTTATTTCTCACAGCTTTA

Product: putative structural protein/integral membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNIDKILHLVTYAGQIMLENGAETYRVEETMKLICNSYKIFNTDIFVIPTTIIISVSFDSGQTLTKVKRIENRTVNLDKV
SKVNDLSRKICTNHLPLNTIEETLDSINSNDKYSNIMQIFAFSMVAGFFTLFFGGTIKDFFVSLFIGALLQIISLRLSQI
ETNAFFINILCGSSTTFIAYFSTTMGFGNSMNKIIIGSLMPLVPGLSITNAIRDIIAGELVAGLSKLTEAFLIAAAIAIG
AGITLSLGINFLER

Sequences:

>Translated_254_residues
MNIDKILHLVTYAGQIMLENGAETYRVEETMKLICNSYKIFNTDIFVIPTTIIISVSFDSGQTLTKVKRIENRTVNLDKV
SKVNDLSRKICTNHLPLNTIEETLDSINSNDKYSNIMQIFAFSMVAGFFTLFFGGTIKDFFVSLFIGALLQIISLRLSQI
ETNAFFINILCGSSTTFIAYFSTTMGFGNSMNKIIIGSLMPLVPGLSITNAIRDIIAGELVAGLSKLTEAFLIAAAIAIG
AGITLSLGINFLER
>Mature_254_residues
MNIDKILHLVTYAGQIMLENGAETYRVEETMKLICNSYKIFNTDIFVIPTTIIISVSFDSGQTLTKVKRIENRTVNLDKV
SKVNDLSRKICTNHLPLNTIEETLDSINSNDKYSNIMQIFAFSMVAGFFTLFFGGTIKDFFVSLFIGALLQIISLRLSQI
ETNAFFINILCGSSTTFIAYFSTTMGFGNSMNKIIIGSLMPLVPGLSITNAIRDIIAGELVAGLSKLTEAFLIAAAIAIG
AGITLSLGINFLER

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27913; Mature: 27913

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDKILHLVTYAGQIMLENGAETYRVEETMKLICNSYKIFNTDIFVIPTTIIISVSFDS
CCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCEEECCCEEEEEEEEEEEEECCC
GQTLTKVKRIENRTVNLDKVSKVNDLSRKICTNHLPLNTIEETLDSINSNDKYSNIMQIF
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH
AFSMVAGFFTLFFGGTIKDFFVSLFIGALLQIISLRLSQIETNAFFINILCGSSTTFIAY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEE
FSTTMGFGNSMNKIIIGSLMPLVPGLSITNAIRDIIAGELVAGLSKLTEAFLIAAAIAIG
EHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGITLSLGINFLER
CCCEEEECHHHHCC
>Mature Secondary Structure
MNIDKILHLVTYAGQIMLENGAETYRVEETMKLICNSYKIFNTDIFVIPTTIIISVSFDS
CCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCEEECCCEEEEEEEEEEEEECCC
GQTLTKVKRIENRTVNLDKVSKVNDLSRKICTNHLPLNTIEETLDSINSNDKYSNIMQIF
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH
AFSMVAGFFTLFFGGTIKDFFVSLFIGALLQIISLRLSQIETNAFFINILCGSSTTFIAY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEE
FSTTMGFGNSMNKIIIGSLMPLVPGLSITNAIRDIIAGELVAGLSKLTEAFLIAAAIAIG
EHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGITLSLGINFLER
CCCEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA