| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is yjjP [C]
Identifier: 28211909
GI number: 28211909
Start: 2441951
End: 2442715
Strand: Direct
Name: yjjP [C]
Synonym: CTC02313
Alternate gene names: 28211909
Gene position: 2441951-2442715 (Clockwise)
Preceding gene: 28211896
Following gene: 28211910
Centisome position: 87.24
GC content: 30.46
Gene sequence:
>765_bases ATGAACATTGACAAAATTCTTCATTTAGTAACCTATGCAGGCCAGATAATGCTTGAAAATGGAGCAGAAACATATCGTGT AGAAGAAACTATGAAGCTAATCTGCAATTCTTATAAAATATTTAATACAGATATTTTTGTTATACCCACTACCATAATCA TATCTGTATCATTCGATTCTGGACAAACCTTAACTAAAGTAAAAAGAATAGAAAATAGAACAGTAAACTTAGATAAAGTT TCAAAAGTTAATGATCTATCACGAAAAATATGTACTAATCATTTACCCTTAAATACTATAGAAGAAACATTAGATAGTAT AAATTCTAACGATAAATATAGTAACATTATGCAAATCTTTGCTTTTTCTATGGTGGCAGGTTTTTTTACATTATTTTTCG GTGGAACCATTAAGGATTTCTTTGTATCTCTTTTTATTGGGGCTCTATTACAAATTATATCCTTAAGATTATCCCAAATT GAAACTAATGCTTTTTTTATTAATATATTATGTGGCTCATCAACCACCTTTATCGCATATTTCAGCACCACTATGGGATT TGGCAATAGTATGAACAAAATAATAATAGGTTCTTTAATGCCTTTAGTTCCTGGTCTCTCTATAACAAATGCTATACGGG ACATCATAGCTGGTGAATTGGTAGCAGGTCTTTCTAAACTTACTGAAGCCTTTTTAATAGCTGCTGCTATAGCTATAGGT GCTGGAATTACACTATCACTGGGAATTAATTTTTTAGAGAGGTGA
Upstream 100 bases:
>100_bases AAAATAATAGCAACTTAAGTCTACATTCTATACATTTTTCTGCAAAATTATGTTATAATACTTCATAAATGTATATTTTT TTAGAATAGAAGGTAAAATT
Downstream 100 bases:
>100_bases TTTACATATGTTTATTTATTGTTTATACGCTTTTTTAACTTCTCTTGGTTTTGGTATTATTTTTAATGTTAAAGGAAAAA ATTTATTTCTCACAGCTTTA
Product: putative structural protein/integral membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNIDKILHLVTYAGQIMLENGAETYRVEETMKLICNSYKIFNTDIFVIPTTIIISVSFDSGQTLTKVKRIENRTVNLDKV SKVNDLSRKICTNHLPLNTIEETLDSINSNDKYSNIMQIFAFSMVAGFFTLFFGGTIKDFFVSLFIGALLQIISLRLSQI ETNAFFINILCGSSTTFIAYFSTTMGFGNSMNKIIIGSLMPLVPGLSITNAIRDIIAGELVAGLSKLTEAFLIAAAIAIG AGITLSLGINFLER
Sequences:
>Translated_254_residues MNIDKILHLVTYAGQIMLENGAETYRVEETMKLICNSYKIFNTDIFVIPTTIIISVSFDSGQTLTKVKRIENRTVNLDKV SKVNDLSRKICTNHLPLNTIEETLDSINSNDKYSNIMQIFAFSMVAGFFTLFFGGTIKDFFVSLFIGALLQIISLRLSQI ETNAFFINILCGSSTTFIAYFSTTMGFGNSMNKIIIGSLMPLVPGLSITNAIRDIIAGELVAGLSKLTEAFLIAAAIAIG AGITLSLGINFLER >Mature_254_residues MNIDKILHLVTYAGQIMLENGAETYRVEETMKLICNSYKIFNTDIFVIPTTIIISVSFDSGQTLTKVKRIENRTVNLDKV SKVNDLSRKICTNHLPLNTIEETLDSINSNDKYSNIMQIFAFSMVAGFFTLFFGGTIKDFFVSLFIGALLQIISLRLSQI ETNAFFINILCGSSTTFIAYFSTTMGFGNSMNKIIIGSLMPLVPGLSITNAIRDIIAGELVAGLSKLTEAFLIAAAIAIG AGITLSLGINFLER
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27913; Mature: 27913
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDKILHLVTYAGQIMLENGAETYRVEETMKLICNSYKIFNTDIFVIPTTIIISVSFDS CCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCEEECCCEEEEEEEEEEEEECCC GQTLTKVKRIENRTVNLDKVSKVNDLSRKICTNHLPLNTIEETLDSINSNDKYSNIMQIF CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH AFSMVAGFFTLFFGGTIKDFFVSLFIGALLQIISLRLSQIETNAFFINILCGSSTTFIAY HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEE FSTTMGFGNSMNKIIIGSLMPLVPGLSITNAIRDIIAGELVAGLSKLTEAFLIAAAIAIG EHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGITLSLGINFLER CCCEEEECHHHHCC >Mature Secondary Structure MNIDKILHLVTYAGQIMLENGAETYRVEETMKLICNSYKIFNTDIFVIPTTIIISVSFDS CCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCEEECCCEEEEEEEEEEEEECCC GQTLTKVKRIENRTVNLDKVSKVNDLSRKICTNHLPLNTIEETLDSINSNDKYSNIMQIF CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH AFSMVAGFFTLFFGGTIKDFFVSLFIGALLQIISLRLSQIETNAFFINILCGSSTTFIAY HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEE FSTTMGFGNSMNKIIIGSLMPLVPGLSITNAIRDIIAGELVAGLSKLTEAFLIAAAIAIG EHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGITLSLGINFLER CCCEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA