Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is cshA [H]

Identifier: 28211793

GI number: 28211793

Start: 2310305

End: 2311417

Strand: Direct

Name: cshA [H]

Synonym: CTC02184

Alternate gene names: 28211793

Gene position: 2310305-2311417 (Clockwise)

Preceding gene: 28211771

Following gene: 28211798

Centisome position: 82.53

GC content: 29.02

Gene sequence:

>1113_bases
ATGACAAATTTTAAAGAATTAGGACTTAGCAATGATTTAATACAAAATCTTAAAACTCAAGGGATAAATAGCCCTACTCC
AATTCAAAGAGAAAGTATACTCCTTATAAAGGAGGGTAATGATGTTATAGCTGAGGCACAAACTGGTACTGGAAAAACTT
TGGCATTTCTTTTACCCATGTTTGAAAATATGTCTCCTAATATAAATACAATTCAAGGTTTAATAGTAACTCCAACACGG
GAACTTGCTATTCAAATAACTGAGGAAGCTATGAAATTAAATGAATCTAAGGACTTAAATATTTTATCTGCATATGGTGG
TAAGGATATAGGAAGTCAGCTAAATAAATTAAAAGGCAATATTCATTTAGTTATTGCAACTCCAGGTAGGCTTTTAGATC
ATTTAGATAGAAATACAATAGATCTTAAAAATTTGAAAACATTAGTTTTAGATGAGGCAGATCAAATGCTTCTCATGGGA
TTTAAAAATGAAGTTGAGACCATTATAAAACATACATCTAAAAACCGTCAGACTTTATGTTTTTCAGCAACAATGAACTC
TTCTGTTAAGAAACTTGCCTATAAATACATGGATGATCCCAAATTAATAACAATACAAAAAGAAGAAATAACTCTTAAAA
ATATTAAACAAGTTTTAATAGAAACAACGGATAGGAATAAGCTTGATGATTTATGTAAAGTTTTAAATGAAACTAATCCA
TTTATGGCAATCATCTTTTGTAGAACTAAAAGAAGAGTTGATAAACTTGAAATGGATCTTTATCAAAGGGGTTATAATTG
TAAAAAGTTACATGGAGATTTAACTCAATCCAAACGTGAAAAAGTGATGAAAGACTTCAAAAATACAAAAATTCAATATT
TAATAGCCACTGATGTAGCTGCTAGAGGACTCGATATAACAGGTGTTACTCATATATATAACTACGATATACCTGAAAAT
ACTGAGAATTACATACATCGTATAGGTCGAACCGGAAGAGCTGGCGAAAAAGGATATGCTTACCTTTTTATAGATCTAAA
AGATAAAGAAACTTTGAATATAATTGAAAAAGGAATAAAGACTAAAATTGAGAGAATAAAAAATCATAAATAA

Upstream 100 bases:

>100_bases
GCGCCTCACGAAATTTTAGCTATACAGCTAAAATTGGTTCGCTGCTTATGTTATAATTATGTAGCGTTGAAGAAAATAAT
TTTAGAAGGAGCAACTTATA

Downstream 100 bases:

>100_bases
TAATTCAAGTAATATTATCATTAATTCTTATACTCTTTAATTAATTTTGGATATTAAAAACCCCTCCAGTAGATTGGAGG
GGTTTTCTATATAGATCTAT

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MTNFKELGLSNDLIQNLKTQGINSPTPIQRESILLIKEGNDVIAEAQTGTGKTLAFLLPMFENMSPNINTIQGLIVTPTR
ELAIQITEEAMKLNESKDLNILSAYGGKDIGSQLNKLKGNIHLVIATPGRLLDHLDRNTIDLKNLKTLVLDEADQMLLMG
FKNEVETIIKHTSKNRQTLCFSATMNSSVKKLAYKYMDDPKLITIQKEEITLKNIKQVLIETTDRNKLDDLCKVLNETNP
FMAIIFCRTKRRVDKLEMDLYQRGYNCKKLHGDLTQSKREKVMKDFKNTKIQYLIATDVAARGLDITGVTHIYNYDIPEN
TENYIHRIGRTGRAGEKGYAYLFIDLKDKETLNIIEKGIKTKIERIKNHK

Sequences:

>Translated_370_residues
MTNFKELGLSNDLIQNLKTQGINSPTPIQRESILLIKEGNDVIAEAQTGTGKTLAFLLPMFENMSPNINTIQGLIVTPTR
ELAIQITEEAMKLNESKDLNILSAYGGKDIGSQLNKLKGNIHLVIATPGRLLDHLDRNTIDLKNLKTLVLDEADQMLLMG
FKNEVETIIKHTSKNRQTLCFSATMNSSVKKLAYKYMDDPKLITIQKEEITLKNIKQVLIETTDRNKLDDLCKVLNETNP
FMAIIFCRTKRRVDKLEMDLYQRGYNCKKLHGDLTQSKREKVMKDFKNTKIQYLIATDVAARGLDITGVTHIYNYDIPEN
TENYIHRIGRTGRAGEKGYAYLFIDLKDKETLNIIEKGIKTKIERIKNHK
>Mature_369_residues
TNFKELGLSNDLIQNLKTQGINSPTPIQRESILLIKEGNDVIAEAQTGTGKTLAFLLPMFENMSPNINTIQGLIVTPTRE
LAIQITEEAMKLNESKDLNILSAYGGKDIGSQLNKLKGNIHLVIATPGRLLDHLDRNTIDLKNLKTLVLDEADQMLLMGF
KNEVETIIKHTSKNRQTLCFSATMNSSVKKLAYKYMDDPKLITIQKEEITLKNIKQVLIETTDRNKLDDLCKVLNETNPF
MAIIFCRTKRRVDKLEMDLYQRGYNCKKLHGDLTQSKREKVMKDFKNTKIQYLIATDVAARGLDITGVTHIYNYDIPENT
ENYIHRIGRTGRAGEKGYAYLFIDLKDKETLNIIEKGIKTKIERIKNHK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=365, Percent_Identity=37.5342465753425, Blast_Score=272, Evalue=4e-73,
Organism=Homo sapiens, GI169881239, Length=371, Percent_Identity=37.7358490566038, Blast_Score=257, Evalue=1e-68,
Organism=Homo sapiens, GI13514809, Length=371, Percent_Identity=37.7358490566038, Blast_Score=257, Evalue=1e-68,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=38.0434782608696, Blast_Score=257, Evalue=1e-68,
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=38.0434782608696, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=38.0434782608696, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI222352149, Length=378, Percent_Identity=38.6243386243386, Blast_Score=255, Evalue=4e-68,
Organism=Homo sapiens, GI41327773, Length=351, Percent_Identity=38.1766381766382, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=38.5245901639344, Blast_Score=248, Evalue=6e-66,
Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=38.0952380952381, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=38.0952380952381, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI20149629, Length=364, Percent_Identity=40.1098901098901, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI164664518, Length=367, Percent_Identity=34.8773841961853, Blast_Score=242, Evalue=3e-64,
Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=37.9781420765027, Blast_Score=242, Evalue=5e-64,
Organism=Homo sapiens, GI148613856, Length=383, Percent_Identity=36.2924281984334, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI38201710, Length=383, Percent_Identity=36.2924281984334, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=36.3128491620112, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI216548263, Length=363, Percent_Identity=36.0881542699724, Blast_Score=231, Evalue=7e-61,
Organism=Homo sapiens, GI262231852, Length=363, Percent_Identity=36.0881542699724, Blast_Score=231, Evalue=7e-61,
Organism=Homo sapiens, GI13129006, Length=380, Percent_Identity=36.3157894736842, Blast_Score=231, Evalue=8e-61,
Organism=Homo sapiens, GI13518015, Length=363, Percent_Identity=36.0881542699724, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI4758138, Length=351, Percent_Identity=37.6068376068376, Blast_Score=228, Evalue=5e-60,
Organism=Homo sapiens, GI55749865, Length=345, Percent_Identity=36.8115942028986, Blast_Score=228, Evalue=6e-60,
Organism=Homo sapiens, GI31542656, Length=372, Percent_Identity=36.8279569892473, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=37.2549019607843, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI224593278, Length=368, Percent_Identity=35.054347826087, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI50659095, Length=380, Percent_Identity=36.0526315789474, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI41327771, Length=409, Percent_Identity=33.2518337408313, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI188035877, Length=369, Percent_Identity=33.8753387533875, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI8922886, Length=380, Percent_Identity=35.2631578947368, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI6005743, Length=380, Percent_Identity=35.2631578947368, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI41327776, Length=363, Percent_Identity=36.0881542699724, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI164419732, Length=362, Percent_Identity=34.5303867403315, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI62241022, Length=362, Percent_Identity=35.3591160220994, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI13514831, Length=354, Percent_Identity=35.0282485875706, Blast_Score=196, Evalue=2e-50,
Organism=Homo sapiens, GI21040371, Length=370, Percent_Identity=31.3513513513514, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI4758112, Length=372, Percent_Identity=29.5698924731183, Blast_Score=192, Evalue=3e-49,
Organism=Homo sapiens, GI18375623, Length=372, Percent_Identity=29.5698924731183, Blast_Score=192, Evalue=3e-49,
Organism=Homo sapiens, GI62241024, Length=340, Percent_Identity=35.8823529411765, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI164419743, Length=346, Percent_Identity=32.9479768786127, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI51094101, Length=346, Percent_Identity=32.9479768786127, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI38569503, Length=370, Percent_Identity=32.1621621621622, Blast_Score=184, Evalue=8e-47,
Organism=Homo sapiens, GI38569505, Length=370, Percent_Identity=32.1621621621622, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI41327779, Length=387, Percent_Identity=30.2325581395349, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI38327634, Length=342, Percent_Identity=35.0877192982456, Blast_Score=165, Evalue=6e-41,
Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=28.2828282828283, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI256223453, Length=365, Percent_Identity=28.2191780821918, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI256773275, Length=371, Percent_Identity=28.5714285714286, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI4826686, Length=331, Percent_Identity=30.8157099697885, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI154759257, Length=434, Percent_Identity=25.8064516129032, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI9966805, Length=307, Percent_Identity=29.6416938110749, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI17505907, Length=214, Percent_Identity=34.1121495327103, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=34.1121495327103, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI51242943, Length=367, Percent_Identity=23.1607629427793, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI51242947, Length=367, Percent_Identity=23.1607629427793, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI148612816, Length=352, Percent_Identity=23.5795454545455, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4557365, Length=342, Percent_Identity=25.4385964912281, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI110735439, Length=353, Percent_Identity=22.0963172804533, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI169218196, Length=353, Percent_Identity=22.0963172804533, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87082221, Length=367, Percent_Identity=40.8719346049046, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI1787016, Length=370, Percent_Identity=37.8378378378378, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI1790214, Length=346, Percent_Identity=38.150289017341, Blast_Score=248, Evalue=6e-67,
Organism=Escherichia coli, GI1787605, Length=365, Percent_Identity=36.986301369863, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1788930, Length=378, Percent_Identity=35.978835978836, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI48994977, Length=368, Percent_Identity=23.3695652173913, Blast_Score=88, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71987143, Length=365, Percent_Identity=38.6301369863014, Blast_Score=280, Evalue=8e-76,
Organism=Caenorhabditis elegans, GI71995724, Length=368, Percent_Identity=36.9565217391304, Blast_Score=266, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17507121, Length=368, Percent_Identity=36.6847826086957, Blast_Score=265, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17552114, Length=363, Percent_Identity=35.8126721763085, Blast_Score=262, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI17555296, Length=367, Percent_Identity=37.6021798365123, Blast_Score=242, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI115533224, Length=357, Percent_Identity=38.375350140056, Blast_Score=239, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=35.8695652173913, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=35.8695652173913, Blast_Score=232, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI86570094, Length=351, Percent_Identity=37.6068376068376, Blast_Score=232, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71995514, Length=368, Percent_Identity=35.8695652173913, Blast_Score=232, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17507945, Length=362, Percent_Identity=37.292817679558, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=35.230352303523, Blast_Score=222, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=34.8167539267016, Blast_Score=220, Evalue=7e-58,
Organism=Caenorhabditis elegans, GI17510559, Length=386, Percent_Identity=33.160621761658, Blast_Score=216, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17537549, Length=374, Percent_Identity=33.4224598930481, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=35.0923482849604, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI115532548, Length=374, Percent_Identity=35.0267379679144, Blast_Score=213, Evalue=9e-56,
Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=34.5013477088949, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507877, Length=368, Percent_Identity=35.5978260869565, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=36.8983957219251, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17509811, Length=359, Percent_Identity=32.8690807799443, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71999646, Length=346, Percent_Identity=32.0809248554913, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI71999644, Length=346, Percent_Identity=32.0809248554913, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=36.4864864864865, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17536099, Length=393, Percent_Identity=33.587786259542, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17536101, Length=393, Percent_Identity=33.587786259542, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17553716, Length=359, Percent_Identity=31.4763231197772, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=33.587786259542, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI71982858, Length=360, Percent_Identity=28.6111111111111, Blast_Score=184, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI71990816, Length=381, Percent_Identity=33.0708661417323, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17505370, Length=350, Percent_Identity=34.2857142857143, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=28.1609195402299, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17508543, Length=361, Percent_Identity=29.3628808864266, Blast_Score=160, Evalue=9e-40,
Organism=Caenorhabditis elegans, GI193208216, Length=397, Percent_Identity=31.7380352644836, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17507641, Length=404, Percent_Identity=29.7029702970297, Blast_Score=144, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17556951, Length=344, Percent_Identity=27.906976744186, Blast_Score=141, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI32564046, Length=393, Percent_Identity=30.2798982188295, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI25148203, Length=413, Percent_Identity=27.3607748184019, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI25148291, Length=351, Percent_Identity=25.9259259259259, Blast_Score=124, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI71997889, Length=391, Percent_Identity=27.1099744245524, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17557982, Length=396, Percent_Identity=27.7777777777778, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17566630, Length=330, Percent_Identity=27.8787878787879, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17565430, Length=391, Percent_Identity=25.0639386189258, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71982862, Length=206, Percent_Identity=27.1844660194175, Blast_Score=104, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=102, Percent_Identity=44.1176470588235, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25148205, Length=338, Percent_Identity=27.5147928994083, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI25145561, Length=377, Percent_Identity=23.6074270557029, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI32564293, Length=125, Percent_Identity=33.6, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71987993, Length=347, Percent_Identity=22.7665706051873, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71987997, Length=347, Percent_Identity=22.7665706051873, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=39.344262295082, Blast_Score=271, Evalue=1e-73,
Organism=Saccharomyces cerevisiae, GI6325138, Length=362, Percent_Identity=39.2265193370166, Blast_Score=258, Evalue=7e-70,
Organism=Saccharomyces cerevisiae, GI6324778, Length=379, Percent_Identity=38.5224274406332, Blast_Score=256, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=38.5474860335196, Blast_Score=254, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=35.8126721763085, Blast_Score=249, Evalue=5e-67,
Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=34.9726775956284, Blast_Score=220, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=34.9726775956284, Blast_Score=220, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6321360, Length=335, Percent_Identity=38.8059701492537, Blast_Score=220, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6321856, Length=366, Percent_Identity=38.2513661202186, Blast_Score=217, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6323021, Length=370, Percent_Identity=34.8648648648649, Blast_Score=216, Evalue=5e-57,
Organism=Saccharomyces cerevisiae, GI6320449, Length=384, Percent_Identity=37.5, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=35.1648351648352, Blast_Score=210, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6321963, Length=378, Percent_Identity=37.037037037037, Blast_Score=209, Evalue=7e-55,
Organism=Saccharomyces cerevisiae, GI6324620, Length=363, Percent_Identity=33.0578512396694, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6320119, Length=369, Percent_Identity=30.3523035230352, Blast_Score=186, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=33.8983050847458, Blast_Score=182, Evalue=9e-47,
Organism=Saccharomyces cerevisiae, GI6320400, Length=359, Percent_Identity=36.4902506963788, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6323947, Length=353, Percent_Identity=35.6940509915014, Blast_Score=180, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6319714, Length=374, Percent_Identity=31.0160427807487, Blast_Score=167, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6321267, Length=330, Percent_Identity=34.5454545454545, Blast_Score=157, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=29.3689320388349, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6321111, Length=361, Percent_Identity=29.6398891966759, Blast_Score=145, Evalue=9e-36,
Organism=Saccharomyces cerevisiae, GI6322876, Length=426, Percent_Identity=29.81220657277, Blast_Score=141, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6320173, Length=237, Percent_Identity=32.0675105485232, Blast_Score=139, Evalue=6e-34,
Organism=Saccharomyces cerevisiae, GI6324366, Length=350, Percent_Identity=29.7142857142857, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6321374, Length=424, Percent_Identity=25.2358490566038, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6323844, Length=351, Percent_Identity=23.3618233618234, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24645031, Length=367, Percent_Identity=36.2397820163488, Blast_Score=264, Evalue=9e-71,
Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=40.3409090909091, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24644483, Length=356, Percent_Identity=38.4831460674157, Blast_Score=249, Evalue=3e-66,
Organism=Drosophila melanogaster, GI24644479, Length=356, Percent_Identity=37.9213483146067, Blast_Score=249, Evalue=3e-66,
Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=38.0821917808219, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=38.0821917808219, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=38.0821917808219, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=38.0821917808219, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI17985987, Length=391, Percent_Identity=37.0843989769821, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24644487, Length=356, Percent_Identity=38.4831460674157, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI45551833, Length=356, Percent_Identity=38.4831460674157, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24644485, Length=356, Percent_Identity=38.4831460674157, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI281361218, Length=356, Percent_Identity=38.4831460674157, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24644481, Length=356, Percent_Identity=38.4831460674157, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24583281, Length=363, Percent_Identity=34.7107438016529, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24583279, Length=363, Percent_Identity=34.7107438016529, Blast_Score=245, Evalue=3e-65,
Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=38.5714285714286, Blast_Score=243, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24662330, Length=358, Percent_Identity=37.4301675977654, Blast_Score=243, Evalue=1e-64,
Organism=Drosophila melanogaster, GI21355075, Length=361, Percent_Identity=37.3961218836565, Blast_Score=235, Evalue=4e-62,
Organism=Drosophila melanogaster, GI18857967, Length=386, Percent_Identity=35.4922279792746, Blast_Score=234, Evalue=7e-62,
Organism=Drosophila melanogaster, GI24585582, Length=356, Percent_Identity=39.3258426966292, Blast_Score=233, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=38.2436260623229, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI21356161, Length=378, Percent_Identity=37.3015873015873, Blast_Score=224, Evalue=7e-59,
Organism=Drosophila melanogaster, GI17977678, Length=362, Percent_Identity=34.8066298342541, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI17136814, Length=372, Percent_Identity=37.3655913978495, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24584994, Length=378, Percent_Identity=34.1269841269841, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI17647335, Length=354, Percent_Identity=34.4632768361582, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=36.4516129032258, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI28575014, Length=349, Percent_Identity=32.0916905444126, Blast_Score=194, Evalue=7e-50,
Organism=Drosophila melanogaster, GI24581954, Length=371, Percent_Identity=29.9191374663073, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24581952, Length=371, Percent_Identity=29.9191374663073, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24581956, Length=371, Percent_Identity=29.9191374663073, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI21355559, Length=367, Percent_Identity=32.6975476839237, Blast_Score=170, Evalue=1e-42,
Organism=Drosophila melanogaster, GI28571808, Length=351, Percent_Identity=34.1880341880342, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28571809, Length=351, Percent_Identity=34.1880341880342, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=30.9333333333333, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24666101, Length=355, Percent_Identity=31.5492957746479, Blast_Score=165, Evalue=4e-41,
Organism=Drosophila melanogaster, GI28571338, Length=441, Percent_Identity=29.4784580498866, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI18859659, Length=441, Percent_Identity=29.4784580498866, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24668515, Length=358, Percent_Identity=31.5642458100559, Blast_Score=151, Evalue=7e-37,
Organism=Drosophila melanogaster, GI20130173, Length=444, Percent_Identity=26.1261261261261, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24640164, Length=346, Percent_Identity=26.0115606936416, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24643725, Length=394, Percent_Identity=26.9035532994924, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI19920478, Length=370, Percent_Identity=27.027027027027, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI17136666, Length=429, Percent_Identity=27.5058275058275, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24646066, Length=345, Percent_Identity=25.2173913043478, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 42160; Mature: 42028

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00362 RIBOSOMAL_S15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTNFKELGLSNDLIQNLKTQGINSPTPIQRESILLIKEGNDVIAEAQTGTGKTLAFLLPM
CCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHH
FENMSPNINTIQGLIVTPTRELAIQITEEAMKLNESKDLNILSAYGGKDIGSQLNKLKGN
HHCCCCCCCCEEEEEECCCHHHHEEEHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCC
IHLVIATPGRLLDHLDRNTIDLKNLKTLVLDEADQMLLMGFKNEVETIIKHTSKNRQTLC
EEEEEECCHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
FSATMNSSVKKLAYKYMDDPKLITIQKEEITLKNIKQVLIETTDRNKLDDLCKVLNETNP
EEEHHHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
FMAIIFCRTKRRVDKLEMDLYQRGYNCKKLHGDLTQSKREKVMKDFKNTKIQYLIATDVA
EEEEEEECCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEECHH
ARGLDITGVTHIYNYDIPENTENYIHRIGRTGRAGEKGYAYLFIDLKDKETLNIIEKGIK
HCCCCEECEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHH
TKIERIKNHK
HHHHHHHCCC
>Mature Secondary Structure 
TNFKELGLSNDLIQNLKTQGINSPTPIQRESILLIKEGNDVIAEAQTGTGKTLAFLLPM
CCHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHH
FENMSPNINTIQGLIVTPTRELAIQITEEAMKLNESKDLNILSAYGGKDIGSQLNKLKGN
HHCCCCCCCCEEEEEECCCHHHHEEEHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCC
IHLVIATPGRLLDHLDRNTIDLKNLKTLVLDEADQMLLMGFKNEVETIIKHTSKNRQTLC
EEEEEECCHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
FSATMNSSVKKLAYKYMDDPKLITIQKEEITLKNIKQVLIETTDRNKLDDLCKVLNETNP
EEEHHHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
FMAIIFCRTKRRVDKLEMDLYQRGYNCKKLHGDLTQSKREKVMKDFKNTKIQYLIATDVA
EEEEEEECCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEECHH
ARGLDITGVTHIYNYDIPENTENYIHRIGRTGRAGEKGYAYLFIDLKDKETLNIIEKGIK
HCCCCEECEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHH
TKIERIKNHK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]